Sarcophilus harrisii (Tasmanian devil): 100932053
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Entry
100932053 CDS
T02286
Symbol
TRAF1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04064
NF-kappa B signaling pathway
shr04210
Apoptosis
shr04668
TNF signaling pathway
shr05200
Pathways in cancer
shr05202
Transcriptional misregulation in cancer
shr05203
Viral carcinogenesis
shr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100932053 (TRAF1)
04668 TNF signaling pathway
100932053 (TRAF1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100932053 (TRAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100932053 (TRAF1)
05202 Transcriptional misregulation in cancer
100932053 (TRAF1)
05203 Viral carcinogenesis
100932053 (TRAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
100932053 (TRAF1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
TRAF3_RING
zf-C3HC4
TRAF2_zf
DUF7221
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100932053
NCBI-ProteinID:
XP_023363148
UniProt:
G3WYM2
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All DBs
Position
2:complement(443889546..443915614)
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AA seq
502 aa
AA seq
DB search
MAENPSDTVLVGPSLTPDENEFPFGYPTSICQSTPEPKYLCCGCHNVLKKAQQTLCGHRY
CSACLSWIVRISKNPICSRCKEENPQTVGDESFLSEEKAFIDAAINKEISELSVHCVISG
CGWTGLMKNFETHECGGISLKDHKQTVTKISTEEKDGLIPIEVQGMCSFADIGCSFKGSQ
EMVKEHEVSSLPEHLRLLLELVSQVKAHHSEKRGSGFSHAKPSGKPLERNLSDLQLQGAV
EVNGDLEADCFRAASSDSEEELALQRFMKEKLLAELQEKLLVFENIVTVLNKEMEASRLA
IAASVHQSGLTQDLILNLEQRVIDLQQTLAQKDLALTKLEQSLHLLEEASYDGVYLWKIT
NFTRRCHESACGRMISLLSPAFYTARYGYKLCLRIYFSGGGTRKGTHLSLFIVVMKGEYD
ALLEWPFRNKVTFMLLDQNNREHVIDSFHPDLTSDSFQRPQGESNTAIGRPMFFPLNKLQ
SPKHAYVKNDTVFLKCVIETNS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatccttctgatactgtccttgtgggccccagcctcacccctgatgaaaat
gaattcccctttggataccctaccagtatctgccagagcacccctgagccaaagtactta
tgctgtggttgtcacaatgttctgaagaaggcccagcagaccctatgtggtcaccgctac
tgttctgcctgcctctcctggatagtgaggatcagcaagaaccctatctgttcaagatgc
aaagaggagaatcctcagactgtgggtgatgaaagtttcttatccgaggaaaaggctttc
attgacgctgccattaataaggagatctctgagcttagtgtgcattgtgtgatttctgga
tgcggctggactggtctcatgaagaatttcgagacacatgaatgtggaggaatctctttg
aaggaccacaagcagactgtgaccaagatcagcacagaagagaaggatggcttgattcca
attgaggtccagggaatgtgctcctttgcagacattggctgttccttcaagggtagccag
gaaatggtgaaagagcatgaggtttcctcactcccagagcacctgaggctgctgttagag
cttgtgagccaagtgaaggcccaccacagtgagaaaaggggctcaggtttcagccacgcc
aagccaagtgggaagcccctggagagaaacctgtcggacctacagctccaaggagccgtg
gaagtcaatggtgacttggaggccgactgctttcgggctgcctcctctgactctgaggag
gagctggccctgcagaggttcatgaaggagaagctgctggctgagctgcaagagaagctg
ctcgtgtttgagaacattgtgactgtcctgaacaaggagatggaggcttcccgcctggcc
atcgctgcctccgtgcaccagagtgggctgacccaggacctgatcctgaacttggagcag
cgggtcatagatttgcaacagaccctggcccagaaagatttagcgctgaccaaattggag
cagagcctccatctcctggaggaagcttcctatgatggcgtctacctatggaaaatcacc
aacttcaccaggagatgtcatgagtctgcatgtggaaggatgatcagtctgttatcacca
gctttttatactgctcgctatggctataaattatgccttcggatctacttcagtggaggt
ggaacaagaaaagggacacatctttcactctttatagtggtcatgaaaggggaatatgat
gctctcctggagtggcctttccgaaataaggtcacattcatgctgctggaccagaacaac
agagagcatgttatcgattcttttcacccagacctgacctcggactccttccagaggcct
cagggggaaagcaacacagccattggccgccctatgttcttcccactgaacaagctgcag
tcccccaaacacgcctatgtgaaaaatgacacggttttcctcaagtgtgtcatagaaacg
aactcatga
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