Sarcophilus harrisii (Tasmanian devil): 100932636
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Entry
100932636 CDS
T02286
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr01524
Platinum drug resistance
shr04115
p53 signaling pathway
shr04210
Apoptosis
shr04215
Apoptosis - multiple species
shr05010
Alzheimer disease
shr05012
Parkinson disease
shr05014
Amyotrophic lateral sclerosis
shr05016
Huntington disease
shr05020
Prion disease
shr05022
Pathways of neurodegeneration - multiple diseases
shr05134
Legionellosis
shr05152
Tuberculosis
shr05160
Hepatitis C
shr05161
Hepatitis B
shr05162
Measles
shr05164
Influenza A
shr05168
Herpes simplex virus 1 infection
shr05169
Epstein-Barr virus infection
shr05200
Pathways in cancer
shr05222
Small cell lung cancer
shr05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100932636 (APAF1)
04215 Apoptosis - multiple species
100932636 (APAF1)
04115 p53 signaling pathway
100932636 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100932636 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
100932636 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
100932636 (APAF1)
05160 Hepatitis C
100932636 (APAF1)
05164 Influenza A
100932636 (APAF1)
05162 Measles
100932636 (APAF1)
05168 Herpes simplex virus 1 infection
100932636 (APAF1)
05169 Epstein-Barr virus infection
100932636 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
100932636 (APAF1)
05152 Tuberculosis
100932636 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
100932636 (APAF1)
05012 Parkinson disease
100932636 (APAF1)
05014 Amyotrophic lateral sclerosis
100932636 (APAF1)
05016 Huntington disease
100932636 (APAF1)
05020 Prion disease
100932636 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
100932636 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100932636 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100932636 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
NB-ARC
Beta-prop_EML_2
APAF1_C
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
APAF-1-like_WHD
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
CARD
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_RFWD3
WD40_like
Beta-prop_NWD2_C
Beta-prop_HPS5
Ge1_WD40
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
KNTC1_N
PEP5_VPS11_N
Beta-prop_Nup120_160
eIF2A
Beta-prop_SPT8
CARD_2
Beta-prop_WDR75_2nd
AAA_16
AAA_18
NPHP3_N
ATPase_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
100932636
NCBI-ProteinID:
XP_012406041
Ensembl:
ENSSHAG00000011224
LinkDB
All DBs
Position
5:complement(26854185..26938731)
Genome browser
AA seq
1251 aa
AA seq
DB search
MDAKAWNCLLQHKEALERDIKTSYLMDHMISDRALSLSEEEKIRDQPTQKKRAAMLIRVL
LEKDNNSYISFYNALLHEGYKDLAFLLQDGIPLSSHNGKDSADGVTSYVKTVLCEGGVPQ
RPVVFVTRKKLVKSIQEKLYKLDGEPGWVTVYGMAGCGKSVLAAEAVRDHSLLQTCFPGG
VHWVSIGKQDKSGLLMKLQNLCTRLDQDGAFSQRLPLNLEEAKDRLHFLMLRKCPRSLLI
LDDIWDSWVLKAFDNHHQILLTSRDKSVTDSVMGPKYVVPVESGLRKEKGLEILSLFVNM
KKTDLPEQAHSIVRECKGSPLVVSLIGALLRDFPNRWGYYLRQLQNKQFKRIRKSSSYDY
EALDEAMSISVERLNEALQKYYKDLSILQKDVRVPTKVLCILWDMETEEVEDILQEFINK
SLLFYDRNGKSFHYYLHDLQVDFLMEKNRDQLQELHKKVVTQFQRYYKVHSLASDQEDSM
YWYNFLVYHMANANMRQELCDLLFSLDWIKAKTELVGPAHLIHEFMQYSHLLDKKDCTIR
ENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEIYRQAKLRAKQEVDKGRLYLEWINKK
NIKKLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVLKAETGERLLEIEAHEDDVL
CCAFSKDDRFIATCSVDKKVKIWNSRTGDLVHTYDEHTEQVNCCHFTNMEHHLLLATGSN
DYFLKLWDLNKKECRNTLFGHANSVNHCRFSPDDKYLVSCSADGTLKLWDVRSANEWSSI
DVRQHFLNSDGRQEDVEVMVKCCSWSSDGMRVMAAAANRLLVFDVHSRNLVGQIHTGYSS
TIRYCDFFPKSHLAVVALSHYCVELWNMDTGIKVADCRGHLSWVHCVAFSPDGSSFLTAS
DDETIRLWETKKVCKNSAVMLKQEVDVVFREDEVMILAIDNVRRLQLINGKTGHTDYLTE
AQKSRISCCCLSPDLRYVALGEEDGSVKILELPNGREFRSRMGHEKAVRRVQFTSDGRTL
ISSSDDSTVQVWNWHSEEFVFLKAHQEPVKDFRLLQNSQLLTWSFDGTVKVWNILTGKVE
KDFVCHQGTVLSCDISPDATKFSSASADKTAKIWSFESHSPLHELRGHEGCVRCSVFSGD
SALLATGDDNGEIRIWNVSTGQRLHSCVPVTVEKGETAFVGWVTDLRFSPDSRTLVSAGA
YLKWWNVDTGESLQTFYTNGTNLKTIHVSPSFKTYVTVDNLGILYVLQALE
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaagcttggaactgtttgttacagcacaaggaagccctggaaagagacatc
aagacttcctacctcatggatcacatgatttctgatcgagctcttagtttatcagaggag
gagaaaataagagatcagcctacccaaaagaagagagcagctatgctgattagggtgtta
cttgaaaaagataataattcatacatatctttctacaatgctctgctacatgaaggttac
aaagatttggctttccttcttcaagacggtatccctcttagttcccataatggaaaagat
tcagcagatggggtgacttcatatgtgaaaacagtgttgtgtgaaggtggtgtaccgcag
aggcctgttgtgtttgtgaccaggaagaagctggtgaagtcgatccaggaaaagctttat
aagcttgatggtgaacctggatgggtcacagtctatggaatggcaggttgtgggaaatct
gtcctagctgcagaagctgtccgggaccacagtctcttacagacatgctttccaggaggt
gtgcattgggtctccattggcaaacaagacaaatctgggctcctgatgaaactccagaat
ctgtgcacaagactggaccaggatggtgctttttcccagagactcccattgaaccttgaa
gaagccaaagaccgccttcatttcttgatgctacgcaagtgcccaaggtctcttttgatc
ttggacgacatatgggattcgtgggtgctaaaagcttttgacaatcaccatcagatcctt
ctcaccagtagagataaaagtgtgaccgactcagtgatgggtcccaaatatgtagtccct
gtggagagtggcttaagaaaagagaaaggattggaaatcttgtcgctctttgttaatatg
aaaaaaacagatctgcccgaacaagctcatagcatcgtgagggagtgcaaaggttcccct
cttgtagtgtctttaattggtgccctattacgtgatttccccaatcggtggggatactac
ctcaggcaacttcagaacaagcagtttaaaagaattaggaagtcttcatcttatgactat
gaagccctggatgaagccatgtccataagtgtggaaagactgaatgaagccctccagaag
tattataaggacctttccatcctgcagaaggatgtaagagtacctactaaggtattatgt
attctttgggacatggagactgaagaagttgaagacatcctacaagaattcattaataaa
tccctcctgttttatgaccgaaatggaaaatcattccattattatttacatgatcttcag
gtcgatttcctcatggagaagaaccgtgaccagctccaggaattgcacaaaaaggttgtg
actcagttccagagatattataaggtgcactctcttgcttctgaccaagaagactccatg
tactggtacaactttctggtgtatcacatggcgaatgccaacatgcgccaagagctttgt
gatctattgttttccctggattggattaaagcaaagactgagcttgtgggacctgctcat
ctgatacatgagtttatgcaatatagccatctattggataagaaggattgcaccattcgt
gagaattttcaagaatttttatctctcaatggacaccttcttggacgccagccatttccc
aatattgtgcagctaggtctctgtgagcccgaaacttctgaaatatatcggcaagccaaa
ttacgagccaagcaggaggtcgacaaagggaggctttacttggaatggataaacaaaaaa
aacatcaagaaactctcccgtttagttgtccgcccccacacagatgctgtttaccacgcc
tgcttttcagaggatgggcagaggattgcttcctgtggtgctgataaaaccttacaggtc
ctgaaagcagaaacaggagagaggctcctggaaatcgaggctcacgaagatgatgtgctt
tgttgtgctttctccaaggatgatagattcatagcgacctgttcagtggataagaaagta
aagatttggaattcaaggactggagatctggtacacacctatgatgagcacaccgagcag
gtcaactgctgtcactttaccaatatggagcatcaccttctcttagccactggctccaat
gactacttcctcaaactctgggatctgaataagaaggagtgtcggaataccctgtttggt
catgcaaattctgtgaaccactgccgattctcaccggacgataaatatttggtcagctgc
tcagcagatggaacgttgaagctttgggatgtgcgttcagccaatgaatggagtagcatt
gatgtgaggcagcacttcttgaattctgatggacgtcaggaagatgtggaggtgatggtg
aaatgttgctcctggtccagcgatgggatgcgagtgatggcagctgctgccaacaggctc
ttggtttttgatgttcatagcaggaatctggtaggacaaatccatactggttatagcagc
accatccggtactgtgatttctttcccaagagtcaccttgctgtggtagccctgtcccac
tactgtgtggagttatggaatatggatacgggtataaaagttgcagattgtcgaggacac
ctgagttgggttcactgtgtagcattttctcctgatggatcttcatttttaacggcttct
gatgatgaaacaatcaggctctgggagacaaagaaagtatgtaagaattctgctgtcatg
ttaaagcaggaagtagatgttgtattccgagaggatgaagtgatgattcttgcaattgac
aacgtaagacgcctgcaactaattaatgggaaaacaggtcataccgattatctgactgaa
gcccagaaatctcgaattagctgctgttgtctgagtccagacctgcgctatgtggcatta
ggagaagaggatgggtctgtaaagattttagagctccccaatggaagagagtttcgatct
cgaatgggacatgagaaagctgtacgacgtgtccagttcacttcggatgggaggaccctt
atttcaagctcagatgattctacagttcaggtgtggaactggcattcagaggaatttgta
tttcttaaagctcaccaagaacccgtgaaggactttaggctcctgcagaattctcagctc
ctgacctggtcatttgatggtacagtgaaggtttggaatatccttactggcaaagtagag
aaggactttgtttgccaccaaggtactgttttgtcttgtgatatttctcccgacgccacc
aaattttcatctgcctctgctgacaagactgcaaagatttggagctttgagagccattcc
cctctccacgagctgaggggtcatgaaggctgtgtgcggtgctctgtcttctctggggat
agtgccctcctggccacgggagatgacaatggagaaatccggatatggaatgtgtccact
ggccagcggcttcattcctgtgtccctgtgactgtggagaaaggagagacagccttcgtg
ggctgggtgaccgacctccgcttctctcctgatagcagaacgctggtgtctgcgggggcc
tatctgaagtggtggaacgtggacaccggtgaatcgttacagaccttctacacaaatgga
accaacctcaagaccatacacgtgtctcctagtttcaaaacatatgtgactgttgataat
cttggaattttatatgtactccaagctttagaatga
DBGET
integrated database retrieval system
