Sarcophilus harrisii (Tasmanian devil): 100933262
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Entry
100933262 CDS
T02286
Symbol
ABCD4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr02010
ABC transporters
shr04146
Peroxisome
shr04977
Vitamin digestion and absorption
shr04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100933262 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100933262 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100933262 (ABCD4)
04980 Cobalamin transport and metabolism
100933262 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100933262 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shr02000
]
100933262 (ABCD4)
Enzymes [BR:
shr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
100933262 (ABCD4)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100933262 (ABCD4)
Transporters [BR:
shr02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
100933262 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
AAA_29
nSTAND1
RsgA_GTPase
AAA_7
DEAD
ArsP_1
DUF6079_1st
NACHT
nSTAND3
T2SSE
ATP-synt_ab
AAA_5
FtsK_SpoIIIE
AAA_23
KAP_NTPase
AAA_25
AAA_19
Motif
Other DBs
NCBI-GeneID:
100933262
NCBI-ProteinID:
XP_031808389
Ensembl:
ENSSHAG00000018805
LinkDB
All DBs
Position
2:306300021..306331067
Genome browser
AA seq
606 aa
AA seq
DB search
MTPPRASRGDPDPAARPRVDLHFLRRFLKIQSILFPSFSSQNALMFLTLLCVTLLEQLVI
YQVGLIPSQYYGVLGNKDLDGFKTLTCLALVLIVVNSTLKSFDQFICNLLYVNWRKNLTE
HLHCLYFRGRIYYTLNVIRDDIDNPDQRISQDVERFCRQLSTMASKLIISPFTISYYTYQ
CFQSTSWLGPVSIFGYFVLGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHVQLRVNAEPAA
FYRAGHVEHVRTNYRLQKLLQTQKELMSKELWLYIGINTFDYLGSILSYVVIAIPIFSGV
YGDLTPAELSALVSKNAFVSIYLISCFSQLIDLSTTFSDVAGYTHRIGELQETLLDMSLK
PRDCDSEDLDEWDFDEASRSKVTDTAFLLDRVSISVPSSDKPLIKDLSLTVSEGQSLLIT
GNTGTGKSSLLRVLAGLWESMHGTVQMLTSFGPHGVLFLPQRPFFTDGTLREQVIYPLKE
IYPVSGSADDERIMRFLELAGLSSLVARTGGLDQQVDWNWYDVLSPGEMQRLSFARLFYL
QPKYAVLDEATSALTEEVESELYRICQQLGMTLISVGHRQSLEKFHSSVLKLCGGGKWEL
IINKEE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccccgagggcatcccggggggatcccgacccagccgcgagaccccgggtagat
ttacattttctccgacgcttcctaaagatacagtccatcttatttcccagtttttcctca
cagaatgctttgatgttcctgacccttctctgtgtcactctgctggagcagctggtcatc
taccaggtggggctaatacccagtcagtactatggtgtcttaggaaacaaggatctggat
ggattcaagaccctgacatgtttagctcttgttctcatcgtggtcaactccacactgaag
agctttgaccagtttatctgtaacctgttgtatgtgaactggaggaagaatcttactgag
caccttcattgtctttacttccggggccgaatctactacaccctcaacgtgattcgtgat
gacattgataatccggatcagcgtattagtcaagatgtagagaggttctgtcgacagctc
agcaccatggccagcaagctgatcatctcccctttcaccatctcctactacacatatcag
tgctttcaaagtacaagctggcttggaccagtgagtatctttggttactttgtcctggga
accatagtgaacaaagtcctcatgagccctattgtttcaaagctggttcaacaggaaaaa
ctggaaggagatttcaggtttaagcatgtgcagcttcgggtgaatgctgagccagcagct
ttctatagagctgggcatgtagaacatgtgaggacgaattacaggctgcagaaactcttg
cagactcagaaggaactcatgtccaaggaactttggctttatattggcatcaatacattc
gactacttgggcagcatcctgagctatgtggttattgcgattcctatcttcagcggtgtc
tacggcgacttgaccccagcagagctaagtgccctggttagcaagaacgcctttgtgtcc
atttatctcatcagttgcttcagtcaactcattgacctctcaacaaccttctctgatgtg
gctggctatacacatagaattggggaattgcaagagaccctgttggatatgtctttaaag
cctcgagactgtgattcagaagatttggatgaatgggattttgatgaggcctcaagatca
aaggtgactgacacagcctttctcctggatcgggtctccatttcagtcccatcttctgac
aagcctctgattaaggatctgagcctgacagtttctgaggggcagagcctgcttatcaca
gggaacacgggcactggcaagagctccttgctcagggtcctggccggcttgtgggagagc
atgcatggtactgtacagatgctgacaagttttggacctcatggagtgttgtttctgcca
cagagacctttcttcacagatgggactttgcgtgagcaggtaatttatcctttgaaagaa
atctacccagtatcaggttctgctgatgatgagaggatcatgaggttcttggaattagct
ggcctgtcaagtctggtggcaaggacagggggactggaccaacaggtagactggaactgg
tatgatgttttgtccccaggagagatgcaaagactttcttttgcccggctcttctatttg
caacctaaatatgcagtgttggatgaagccacaagcgctctcaccgaagaggtggagagt
gagctgtaccgcatctgccaacagttgggtatgacgctcatcagcgtgggccatcgacaa
agtctagagaagttccattcttcagttctgaaactttgtggaggaggaaaatgggaactt
atcatcaacaaagaagaatga
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