KEGG   Stereum hirsutum: STEHIDRAFT_126041
Entry
STEHIDRAFT_126041 CDS       T03127                                 
Name
(RefSeq) Sm-like ribonucleo protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
shs  Stereum hirsutum
Pathway
shs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    STEHIDRAFT_126041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_126041
   03041 Spliceosome [BR:shs03041]
    STEHIDRAFT_126041
   03032 DNA replication proteins [BR:shs03032]
    STEHIDRAFT_126041
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     STEHIDRAFT_126041
Spliceosome [BR:shs03041]
 Complex A
  U1 snRNP components
   Sm proteins
    STEHIDRAFT_126041
  U2 snRNP components
    STEHIDRAFT_126041
 Complex B
  U1 snRNP components
    STEHIDRAFT_126041
  U4/U6.U5 tri-snRNP components
    STEHIDRAFT_126041
 Complex C
  U2 snRNP components
    STEHIDRAFT_126041
DNA replication proteins [BR:shs03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     STEHIDRAFT_126041
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 18797699
NCBI-ProteinID: XP_007310624
JGI: Stehi1_126041
UniProt: R7RYM4
LinkDB
Position
Unknown
AA seq 179 aa
MPPPKSKGGKMLSLINWRLKVTINDGRALTGQMLAFDRHMNLVLAECEEFRRVRPKKKAG
EAEAGPEQEMKRTLGLVILRGETVVSISVEGPPPVQDDDKKSSLPAGPGRGMPAGRGMGM
MPPMGPPSVARPPMPFAPPGMPGAPPGFHPPGFPPQGMPFQGPPPGFGGPPPGFQPPPQ
NT seq 540 nt   +upstreamnt  +downstreamnt
atgcctcccccaaaatcgaaaggcggtaaaatgctcagtctcatcaactggagactgaag
gtcacgatcaacgacggacgagccctcaccggccagatgctcgcgtttgaccgtcacatg
aatcttgtccttgcagaatgcgaggagttccgacgtgtccgaccgaaaaagaaggcaggg
gaggcagaagcagggccagagcaggagatgaagaggacactggggctcgtcattttgcgc
ggtgagactgtggtgagcatcagtgtagaagggcctcctcctgttcaggacgatgacaaa
aagagctcgctgcctgccggtcctggtcgtggcatgcctgcggggcggggtatgggaatg
atgcctcctatgggacccccatctgtcgcccgtccacccatgccgtttgctcctcctgga
atgccgggggcaccacctggtttccaccctcctggtttccctcctcagggtatgcccttc
caaggtccaccaccaggctttggtggccctcctccaggtttccaaccacccccgcagtag

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