Stella humosa: STHU_40010
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Entry
STHU_40010 CDS
T06078
Symbol
acrB
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shum
Stella humosa
Pathway
shum01501
beta-Lactam resistance
shum01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
STHU_40010 (acrB)
01503 Cationic antimicrobial peptide (CAMP) resistance
STHU_40010 (acrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shum02000
]
STHU_40010 (acrB)
01504 Antimicrobial resistance genes [BR:
shum01504
]
STHU_40010 (acrB)
Transporters [BR:
shum02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
STHU_40010 (acrB)
Antimicrobial resistance genes [BR:
shum01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
STHU_40010 (acrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BBK33367
LinkDB
All DBs
Position
4219352..4222510
Genome browser
AA seq
1052 aa
AA seq
DB search
MARFFIDRPVFAWVIAITMMLAGALAIITLPVAQYPNIAAPQISIAVTYPGASARTVQDT
VVQVIEQRMNGIDGLQYMASSSSSDGSVELTLTFQQGTNADVAQVQVQNKLQLATPLLPQ
EVQQQGIRVTKATRNFLLIVGFVSKDGSLKNYDIANFLASTVQDPISRTAGVGDFQLFGS
QYAMRIWLDPSRLNNYSLTALDVLTAIRAQNVQVSSGQLGGAPSTPGQQLNATIIGSTRL
QTAEQFDAIVLRVNPDGSQVRLRDVARSELGAESYSFDTRYTGNPAAGLAIKLATGANAL
DTVKNVQKTIEDLRPFFPPGIEVIYPIDQTPFIKLSIEEVLKTLAEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAVLSAFGYSINTLTMFAVVLAIGLLVDDAIVVVENVERVM
SEEGLSPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGVIYRQFSITIISAMVL
SVAVAMILTPALCATMLKPVQKGHHHAKRGFFGWFNRSFDRGNRGYQASVGYIMRRTVRF
FLVYALLVAGVVVLYGRVPSSFLPAEDIGQMFVQVQTPPGATMERTQAVVDEVVNYLNND
EKAVVEGTFSVVGFSFAGRGQNGAIIFARLRDWSLRPTPDLRVQALAQRTMARMSQVKDA
IIFAIAPPPVPELGNATGFDFQLQDRAGLGYEQMLAARNQLLGAARQRPELVGVRPNGIE
DAPQFQLVIDRERVAALGLSIADVNNTMSAVWGSAYVNDFIDRGRVKRVYLQGDAPARMM
PDDLNKWYVRNANGQMVPFSAFGSAQWTSGPQKLERYNGVPSFNIQGNAAPGRSSGEAMA
VMEELARQLPAGIGFEWTNLSFEEKASGAQAPALFAISLIVVFLSLAALYESWSVPFAVM
LGVPLGILGAVGAAVLFKLSNDVYFQVGLLTTIGLSAKNAILIVEFAKEAYDRGVPAAEA
ALQAAGQRLRPILMTSLAFILGVTPLAISNGAGSGAQNAIGIGVIGGMLTATFIAIFLVP
MFFVAMMKLFRVKPAIHRNPPEKAPELAFSGD
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcccgattcttcatcgaccggcccgtcttcgcctgggtcatcgccatcaccatgatg
ctggcgggcgcgctcgccatcatcaccctgccggtcgcccagtacccgaacatcgcggca
ccgcagatcagcatcgccgtcacctatccgggtgcctccgcgcgcacggtgcaggacacg
gtggtgcaggtcatcgagcagcgaatgaacggcatcgacgggctgcaatacatggcctcg
tccagcagctccgacggcagcgtcgagctgacgctcaccttccagcagggcaccaacgcc
gacgtggcccaggtgcaggtgcagaacaagctccagctcgccacgccgctgctgccgcag
gaggtccagcagcagggcatccgggtgaccaaggccacccgcaacttcctgctgatcgtc
ggcttcgtgtcgaaggacggcagcctgaagaactacgacatcgccaacttcctggcctcc
accgtccaggatccgatcagccgcaccgccggcgtcggcgatttccagctcttcggctcg
caatacgccatgcgcatctggctcgacccgtcccggctgaacaactacagcctgacggcg
ctggatgtgctgacggcgatccgcgcgcagaacgtccaggtgtcttccggccaactgggc
ggcgcgccctccacgcccggccagcagttgaacgccaccatcatcggctcgacccggttg
cagacggccgagcagttcgacgccatcgtgctgcgcgtgaaccccgatggctcgcaggtc
cgcctgcgcgacgtcgcccgcagcgagctgggggccgagagctattccttcgacacgcgc
tacaccggcaacccggcggccgggctggcgatcaagctggcgaccggcgccaacgcgctc
gacaccgtcaagaacgtgcagaagaccatcgaggacctgcggccgttcttcccgccgggc
atcgaggtcatctacccgatcgaccagacgcccttcatcaagctgtcgatcgaggaggtg
ctgaagaccctggccgaggcgatcgtgctggtcttcctcgtcatgtacctcttcctgcag
aatttccgcgccacgctgatcccgacgatcgcggtgcccgtcgtgctgctcggcaccttc
gcggtgctgtcggccttcggctactcgatcaacacgctgaccatgttcgcggtcgtgctg
gcgatcggcctgctggtggacgacgccatcgtcgtggtcgagaacgtcgagcgcgtgatg
tccgaggaagggctgtcgccgcgcgaggcgacgcgaaaatccatgggccagatccagggc
gcgctggtcggcatcgccatggtgctgtcggcggtgttcgtgcccatggccttcttcggc
gggtcgaccggcgtcatttaccgccagttctcgatcaccatcatctcggccatggtgctg
tcggtggcggtcgcgatgatcctgacgccggccttgtgcgccaccatgctgaagccggtg
cagaagggccatcaccacgccaagcgcggcttcttcggctggttcaaccgcagcttcgac
cgcggcaaccgcggctaccaggcgtccgtcggctacatcatgcggcgcacggtgcggttc
ttcctggtctatgccctgctggtggcgggcgtcgtcgtcctttatggccgcgtcccctcc
tcgttcctgccggccgaggacatcggccagatgttcgtgcaggtgcagacgccgcccggc
gccaccatggagcgcacccaggccgtcgtcgacgaggtcgtcaactacctcaacaacgac
gagaaggcggtcgtcgagggcaccttctcggtggtgggcttcagctttgccggccgcggc
cagaacggcgccatcatcttcgcccgcctgcgcgactggagcctccggccgacgccggac
ctgcgcgtgcaggcactggcccagcgcacgatggcgcgcatgtcccaggtgaaggacgcg
atcatcttcgccatcgccccgccgccggtgccggagctcggcaatgcgacgggcttcgac
ttccagctccaggaccgggccggcctcggctacgagcagatgctggccgcgcgcaaccag
cttctgggggcagcccgccagcggccggaactggtcggcgtccgccccaacggcattgag
gacgccccgcagttccagctcgtcatcgaccgcgagcgggtggccgcactgggcctttcc
atcgccgacgtgaacaacaccatgtcggcggtgtgggggtcggcctatgtgaacgacttc
atcgaccgtggccgcgtgaagcgcgtctacctccagggcgacgcgccggcccgcatgatg
ccggacgacctcaacaagtggtacgtccgcaacgccaacggccagatggtgcccttctcg
gccttcgggtcggcgcaatggacatccgggccgcagaagctggagcgctacaacggcgtg
ccctccttcaacatccagggcaatgccgcccccggccgcagctcgggcgaggcgatggcg
gtgatggaggaactggcgcgccagctaccggccggcatcggcttcgaatggaccaacctg
tccttcgaggagaaggcgtcgggcgcccaggcgccggccctcttcgccatctcgctgatc
gtcgtcttcctgtcgctggccgccctctacgaaagctggtcggtaccgttcgcggtcatg
ctgggcgtgccgctcggcatcctgggggcggtcggtgcggccgtgctgttcaagctgtcg
aacgacgtctatttccaggtcggcctgctgaccaccatcggcctgtcggccaagaacgcc
atcctgatcgtggagttcgccaaggaggcctatgatcgcggcgtgcccgcggcggaggcc
gccctccaggccgcgggccagcgcctgcgcccgatcctgatgacgtcgctcgccttcatc
ctgggcgtgacgccgctcgccatctccaacggggcgggctcgggcgcgcagaacgccatc
ggcatcggcgtcatcggcggcatgctgacggcgaccttcatcgccatcttcctggtgccg
atgttcttcgtcgccatgatgaagctgttccgggtgaagccggcgatccatcgcaacccg
cccgagaaggcgcccgaactcgcgttcagtggggattga
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