Stella humosa: STHU_41780
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Entry
STHU_41780 CDS
T06078
Symbol
cefD
Name
(GenBank) isopenicillin-N epimerase
KO
K04127
isopenicillin-N epimerase [EC:
5.1.1.17
]
Organism
shum
Stella humosa
Pathway
shum00311
Penicillin and cephalosporin biosynthesis
shum01100
Metabolic pathways
shum01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shum00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00311 Penicillin and cephalosporin biosynthesis
STHU_41780 (cefD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
shum01008
]
STHU_41780 (cefD)
Enzymes [BR:
shum01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.17 isopenicillin-N epimerase
STHU_41780 (cefD)
Polyketide biosynthesis proteins [BR:
shum01008
]
Nonribosomal peptide tailoring proteins
Others
STHU_41780 (cefD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
TMP-TENI
SepSecS
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
BBK33544
LinkDB
All DBs
Position
complement(4410368..4411552)
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AA seq
394 aa
AA seq
DB search
MSDNDIPSVIETASEDREGAAIRAEFWLDADVTFLNHGSYGAVPRRVSAAAEIWRQRMER
QPVLFFQETLAPGLRDAAGVLAPFLGVQADDLVFVENATSGANAVLRSLRLAPGDTIVGT
DHGYGAVRNTARHVAAMAGAALVEAKLPFPGTDPADVVRAIDAAIDGRTRLVVVDHVTSP
TALVLPVEDIARLCRRRGVPLLVDGAHAPGMLDLDIAAVGADWYVGNPHKWLFAARGCAA
LWASPSARGDLHPPVVSHGYGAGYLAEFDWTGTRDCSPYLAVDAALAFYRSLGPARLRAR
NKALAAEGARIVAGAWQTEVLTPPAMAGSMALVALPFAVEPTREAARALRTQIWHEHRIE
VPVMAFGGSCHIRISAQIYNEPADYHRLAEIFRR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaacgatatccccagcgtcattgagaccgcatccgaagaccgcgaaggggcg
gccatccgcgccgagttctggctcgacgccgatgtcaccttcctcaatcacggatcgtac
ggcgcggttccacgtcgcgtcagtgccgccgccgaaatctggcgccagcgcatggagcgc
cagcccgtactgttcttccaggagaccttggcccccggcctgcgcgatgccgcgggggtg
ctggcgccgttcctgggcgtccaggcggacgacctcgtcttcgtcgagaacgcgaccagc
ggcgccaacgccgtgctgcgctcgctgcggctggcgccgggcgacaccatcgtcggcacc
gaccatggctatggcgcggtgcgcaacacggcccgccacgtcgcggccatggcgggtgcg
gccctggtcgaggccaagttgccctttccaggcaccgacccggccgacgtcgtccgcgcc
atagacgcggccatcgatggccgcacccggctggtggtggtcgaccacgtcacctcgccc
actgcgctcgtgctgccggtggaggatatcgcccggctgtgccgccggcgcggcgtgccg
ctgctggtcgacggcgcccatgcgccgggcatgctcgatctcgacatcgccgccgtcggt
gccgactggtatgtcggcaacccgcacaagtggctgttcgcggcgcgtggctgtgctgcc
ctatgggcgtcgccatcggccaggggcgacctgcacccgcccgtcgtttcgcacggctat
ggggcgggctacctggccgaattcgactggacgggcacgcgcgactgctcgccctatctg
gccgtcgatgcggcgctcgctttctaccgctcgctcggaccggcgcgccttcgggctcgt
aacaaggcgctggcggccgagggggcgcggatcgtggccggggcctggcagaccgaggtg
ctgacgccgcccgccatggcggggtcgatggcgctggtggcgctgccctttgccgtggag
ccgacgcgggaggccgcccgcgccttgcgcacgcagatctggcacgagcatcggatcgaa
gtgcccgtcatggccttcggcggtagctgccacatccgcatctcggcgcagatatacaac
gagccggcggactaccaccggctcgcggaaatcttcaggcggtag
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