Shewanella sp. W3-18-1: Sputw3181_0686
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Entry
Sputw3181_0686 CDS
T00453
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw01501
beta-Lactam resistance
shw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sputw3181_0686
01503 Cationic antimicrobial peptide (CAMP) resistance
Sputw3181_0686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shw03036
]
Sputw3181_0686
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shw02000
]
Sputw3181_0686
01504 Antimicrobial resistance genes [BR:
shw01504
]
Sputw3181_0686
Chromosome and associated proteins [BR:
shw03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sputw3181_0686
Transporters [BR:
shw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sputw3181_0686
Antimicrobial resistance genes [BR:
shw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sputw3181_0686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
Beta-barrel_RND
YknX_C
BSH_RND
BSH_CzcB
Biotin_lipoyl
HH_MFP_RND
Beta-barrel_YknX
BSH_YknX
BSH_CusB
RND-MFP_C
BSH_LcnD
Peptidase_M23
Beta-barrel_AprE
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
ABM23537
LinkDB
All DBs
Position
761927..763093
Genome browser
AA seq
388 aa
AA seq
DB search
MFKQKMNQQARISPLFSAKNNIHIYSKALFFAFLSLLLICIFAINLPSATAAEDKNEAIP
VTVEAVKAATFADVVKEVGKINAIDSAILNFNASEKISAIHFSNGDKVTKGQVIAELDNT
KAKADLDKAKSTLALAKTKLERVEDLLIKEPFALAKQDVDELRENVNLADADFRQKQAIM
NDYLIKAPFDGQLTSFSQSIGSQIGAGTALVTLYSLHPVEVRYAISQNDFGKAKKGQEVD
VTVEAYGTQIFNGVVNYVAPAIDESAGRVEIHATIDNAEFKLAPGMFANIKQYYSQGTQR
LLVPQNSIIANNEERFVWLVRGDSAIKQSVKLAHNTNDGYAIVTQGLIEGDLVVKTGMQN
LKSDSTIKIVQDKQTLPNTATSGAVEIK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacaaaaaatgaatcaacaagcgcgtatttctcctcttttttctgcaaaaaat
aatatacatatttattcaaaggcgctgttttttgcgtttttatcattattgctcatctgt
atatttgccatcaatttaccctcagctactgccgcagaggataaaaatgaggctattccc
gtcacagtggaggccgtaaaagctgcgacttttgccgatgtagtgaaggaagtgggcaaa
attaacgctattgactcggcgatactcaatttcaacgcgagcgaaaaaatcagtgctatt
cactttagcaatggtgacaaggtgactaaaggacaggtcatagccgagttggataacact
aaggctaaagcggatttagataaggccaaaagtaccttagcgcttgccaaaaccaaactt
gaacgggttgaagatttgctgatcaaagaaccttttgctttggcgaagcaggatgtggat
gagctcagggaaaacgtcaatcttgctgatgcggattttcgccaaaagcaagcgatcatg
aatgactacttaatcaaggcgccctttgatgggcagttaaccagttttagccagtcaatt
ggtagccaaattggtgcgggaactgcccttgtcacgctctacagcttacatcctgttgaa
gtgcgttatgccatcagtcaaaacgatttcggtaaagcgaaaaagggacaagaggtggat
gtcaccgttgaggcctatggaacacagatttttaatggggtagtgaattatgtggctcct
gcaattgatgaaagtgctgggcgtgtcgaaatccatgcaacgattgataacgcagagttt
aagcttgcgcccggcatgtttgccaatattaagcagtattatagtcaaggcactcaacgc
ctattagtgccacaaaattcaattattgcgaataatgaagagcgttttgtctggttagta
aggggagattcagcaataaaacaatcggttaagttagctcataacactaatgacggttat
gccatagtgactcaaggcttaattgaaggtgacttagtggttaaaaccggtatgcaaaat
cttaagtccgatagcacgattaagattgttcaagataaacaaaccttgccgaatacagcg
acttctggcgcagtggagattaagtaa
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