Shewanella sp. W3-18-1: Sputw3181_4068
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Entry
Sputw3181_4068 CDS
T00453
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K18145
membrane fusion protein, multidrug efflux system
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw01501
beta-Lactam resistance
Module
shw_M00649
Multidrug resistance, efflux pump AdeABC
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sputw3181_4068
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shw02000
]
Sputw3181_4068
01504 Antimicrobial resistance genes [BR:
shw01504
]
Sputw3181_4068
Transporters [BR:
shw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sputw3181_4068
Antimicrobial resistance genes [BR:
shw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AdeABC [MD:
M00649
]
Sputw3181_4068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
SPATA24
Motif
Other DBs
NCBI-ProteinID:
ABM26870
UniProt:
A0A6N3J8Y9
LinkDB
All DBs
Position
complement(4676438..4677595)
Genome browser
AA seq
385 aa
AA seq
DB search
MYIKQRHLSFVLVVGIAVLGLVGCDSAVQDEETSAPVQVSVMTLKNEELLVTKDLPGRVA
AVRSAEIRAQISGIVQGRLFEQGAEITSGTVLFQINPAPFKADVDIAAAALLRAEAVWVR
ARQEADRLASLIQTEAVSQQMYDDAISQRDQAAADVAQTKATLARRQLDLQFASVEAPIS
GRIDEALVSEGALVSPTDTTPMARIQQIDQVYVDVRLPASMLKAMRQQANSGAPELAVEI
LSSSGEPLGMQGHILFSGIQVDAGTGDVLLRVLVDNPQHRLLPGLYVKARIPQTYYPTTL
NVPQQAVTRKAGQPQVWVLDEQAKVQPVAVKVDELVAGHYHVVSGLSAGQQIVVEGIERL
SPAAQVVARPWQPTTANQQLSAVVR
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaacagcggcacttaagctttgtattagttgtaggaattgccgtgttggga
ttggtaggttgtgattcagcggtacaggatgaagaaacatctgctccggttcaagtgtca
gtaatgacattaaaaaatgaagaactattggtgactaaagatctgcccggtcgtgtcgct
gcggttcgcagcgctgagatccgcgcgcaaattagcggcatagtgcaaggtcgcctcttc
gaacagggcgccgagataacatctggcactgtgctgttccaaataaatccagcaccattt
aaagcggatgtcgatattgctgcggcagcgttactgcgtgccgaagcggtatgggttcgg
gctcgtcaagaagccgatcgcttggcctctttgatacaaaccgaggccgtcagccaacaa
atgtatgacgatgctatttcccagcgcgatcaggctgccgcggatgtagcccaaaccaaa
gcgacgctggcacggcgtcagttagatctacagtttgccagcgtcgaggcaccaatctcc
ggacgtatagatgaagcattagtgagtgaaggtgcattggtctcaccgaccgataccaca
cccatggcgaggatccaacaaatcgaccaagtgtacgttgatgtacgtttgccagcatca
atgttgaaggcgatgcgtcagcaggccaactctggagccccggagttggctgttgagatc
cttagcagtagtggcgagcctcttggcatgcaagggcatatcttattttccggcattcaa
gtagatgcaggtactggcgatgtactgctgcgcgtactggtagataacccgcagcatcgt
ctattacccggtctttacgtaaaagctcgcattccacaaacttactatcctacgacgctg
aacgtgcctcagcaggcagtgactcgcaaggctggtcaaccccaagtgtgggtgcttgat
gagcaagctaaagtgcaacctgtggccgttaaggtcgatgaattggtggcaggtcactat
cacgtagtatccggcctaagcgctggtcagcagatagttgttgaaggcatcgaacgccta
agccctgcggcgcaggtcgtcgcgcgcccttggcaacctactactgctaatcagcaactt
agcgccgtcgtgcgctaa
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