KEGG   Schistosoma haematobium (urinary blood fluke): MS3_00003800
Entry
MS3_00003800      CDS       T05004                                 
Symbol
SMNDC1_1
Name
(RefSeq) Survival of motor neuron--splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
shx  Schistosoma haematobium (urinary blood fluke)
Pathway
shx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MS3_00003800 (SMNDC1_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shx03041]
    MS3_00003800 (SMNDC1_1)
Spliceosome [BR:shx03041]
 Complex A
  U2 snRNP components
   U2 related factors
    MS3_00003800 (SMNDC1_1)
 Complex B
    MS3_00003800 (SMNDC1_1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    MS3_00003800 (SMNDC1_1)
SSDB
Motif
Pfam: TUDOR SMN_Tudor Tudor_2 Tudor_3
Other DBs
NCBI-GeneID: 24595453
NCBI-ProteinID: XP_051071746
UniProt: A0A922LQL7
LinkDB
Position
ZW:50408188..50409785
AA seq 212 aa
MSDDPQLDLLNHKLQLQQVEAALELDPENGELLQLKRDLEEVIKLSLELLGRTSDTPEVS
WNVGDQCMAMCSRDKLYYRATILEFLGDVSCVVNFDMYDTTDVCQLCHLKPVTTVTPIVK
KKKHDTKSRAIEKKKIKKQRLLQREVEIESFCEKEKNRWLNFSKKMIKTGKTKKSIFASP
EALDGRVGVGTCGIGGKPMTKFTVLNNSSKKQ
NT seq 639 nt   +upstreamnt  +downstreamnt
atgtctgatgatccgcaattagaccttttgaaccacaagctgcaacttcagcaggtcgaa
gcagctctcgagctagatccagaaaacggggaacttctccagctcaaacgagatcttgag
gaagtcatcaaactctcacttgaattattgggcagaacatctgatacaccagaagtatcg
tggaatgttggcgatcagtgcatggccatgtgctcccgtgataaactttactaccgagct
acaatacttgaatttcttggggatgtaagctgcgtcgttaatttcgatatgtacgataca
acggacgtatgccagctgtgtcacttaaagccggtcacgacagttactcctattgtgaaa
aagaaaaaacatgacacgaaatctcgtgctatagaaaagaagaagattaaaaaacaacgt
cttcttcaaagggaagtagagattgagtcgttttgcgaaaaggagaaaaaccgttggctt
aatttcagcaagaaaatgatcaaaactgggaagacaaagaaaagtatcttcgcctctcct
gaagccctggacggtcgtgtgggtgttggaacgtgtggtataggtggcaaaccaatgacc
aagtttaccgtgttaaataacagcagcaaaaaacagtaa

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