Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_3569
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Entry
SHJG_3569 CDS
T02063
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00300
Lysine biosynthesis
shy00550
Peptidoglycan biosynthesis
shy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SHJG_3569
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHJG_3569
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shy01011
]
SHJG_3569
Enzymes [BR:
shy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
SHJG_3569
Peptidoglycan biosynthesis and degradation proteins [BR:
shy01011
]
Precursor biosynthesis
Amino acid ligase
SHJG_3569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AEY88841
LinkDB
All DBs
Position
complement(4148512..4150032)
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AA seq
506 aa
AA seq
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MTYPGLPRPTTLPATPLAELAGQLGVTAPEAVAEVTGITHDSRAVRPGDLYAALPGARLH
GADFVTQAASLGAVAVLTDPTGAERAAASGLPVLVVEDPRGRMGELAATIYRHPGRDLLQ
IGITGTSGKTTTAYLVEGGLKTVRSTGLIGTVEIRIGDERIKSERTTPEATDLQALFAVM
REGGVEAVAMEVSSHALVLGRVDGCVFDVAVFTNLSPEHMEFHSDMEDYFRAKARLFTPE
RSAFGVVNADDEYGRRLAKEATVPVVTFSAEGHPDADWRAQDVQVGPMDSTFTVLGPNGE
RVHAKSPLPGPFNVANTLAAIVALAAAGLDPQTAADGIAAVPGVPGRLERVDAGQPYLAV
VDYAHKTDAVESVLKALRKVTKGRLHVVLGCGGDRDQTKRAPMGAAVARLADTAVLTSDN
PRSEDPLAILATMLQGAASVPAHERGEVLLFEDRAAAVAAAVGRAQAGDTVLVAGKGHEQ
GQDIAGVVRPFDDRQVLREAIQKTQG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgacctatccgggactgccccggccgacgacgctccccgccacacccctcgcggagctc
gccggccagctgggtgtcaccgcgccggaagccgtcgccgaggtcacggggatcacccac
gactcgcgcgcggtccgccccggtgacctgtacgccgccctcccgggcgcccggctgcac
ggcgccgacttcgtcacccaggccgcgagcctgggcgccgtcgccgtgctcaccgatccc
acgggcgccgagcgcgccgccgcgtccgggctgcccgtcctggtggtcgaggacccgcgc
gggcggatgggagagctcgcggccacgatctaccgccacccgggccgcgacctgctccag
atcggcatcaccggcacctccggcaagaccaccaccgcctacctggtggaaggcggcctg
aagaccgtccggtcgaccggcctcatcggcaccgtcgagatccgcatcggcgacgagcgc
atcaagtccgagcgcaccacgcccgaagccaccgacctccaggccctgttcgccgtcatg
cgcgaagggggcgtcgaggcggtcgccatggaggtctccagccacgccctggtcctcggc
cgggtcgacggctgcgtcttcgacgtcgccgtcttcaccaacctcagcccggaacacatg
gagttccactccgacatggaggactacttccgggccaaggcacggctgttcacgccggaa
cgcagcgcgttcggcgtggtcaacgccgacgacgagtacggccgccggctcgcgaaggag
gcgaccgtgccggtcgtcaccttctccgccgagggccacccggacgccgactggcgcgcc
caggacgtccaggtcggccccatggactcgacgttcaccgtgctgggtccgaacggcgag
cgcgtgcacgccaagtcgccgctgccgggccccttcaacgtggcgaacaccctcgccgcc
atcgtcgccctcgccgcggccggcctcgacccgcagaccgccgccgacggcatcgccgcc
gtcccgggcgtcccgggccgcctggagcgcgtcgacgccgggcagccctacctggcggtg
gtcgactacgcccacaagaccgacgccgtcgagtcggtgctcaaggcgctgcgcaaggtc
accaaggggcggctgcacgtcgtcctcggctgcggcggcgaccgcgaccagaccaagcgc
gccccgatgggcgccgccgtggcccggctcgccgacacggccgtactgacctccgacaac
ccccgctccgaggatcccctcgcgatcctcgcgaccatgctccagggcgcggcctccgtg
cccgcgcacgagcgcggcgaggtcctcctcttcgaggaccgggccgccgccgtggccgcc
gccgtgggccgcgcccaggccggcgacaccgtgctggtcgcgggcaagggccacgagcag
ggccaggacatcgccggcgtggtccgtcccttcgacgaccgccaggtgcttcgcgaagct
atccagaagacccagggatga
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