Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_3789
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Entry
SHJG_3789 CDS
T02063
Name
(GenBank) hypothetical protein
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
shy
Streptomyces hygroscopicus subsp. jinggangensis 5008
Pathway
shy00860
Porphyrin metabolism
shy01100
Metabolic pathways
shy01240
Biosynthesis of cofactors
shy03030
DNA replication
Module
shy_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
shy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SHJG_3789
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHJG_3789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shy03032
]
SHJG_3789
Enzymes [BR:
shy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
SHJG_3789
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SHJG_3789
DNA replication proteins [BR:
shy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SHJG_3789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
AEY89061
LinkDB
All DBs
Position
complement(4384366..4385772)
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AA seq
468 aa
AA seq
DB search
MREFIVEADGGSRGNPGPAGYGAVVLDGATGEALTEAAEYIGVATNNVAEYRGLLAGLRA
AHALDPSARVHVRMDSKLVIEQMSGRWKIKHPDMKPLAAEARSVYPPDQVTYEWIPRERN
KHADRLANEAMDAGAKGRQWSPSRSGAVLDTPPAVPEPSGPPGDAAAGAAKARAALAEGR
TAGAAPVPEEAAPPSEQRAESPSEQHPTAPSAGQAPRAGQAPGEQRPESPSEGRPSSSGG
ETVDERRVTSAPGWSAAPDLGAPATLVLLRHGETPLTPQKRFSGSGGTDPSLSAAGREQA
HRVAEALARRGTIQAIVASPLARTRETAEIVAARLNLDVTLDDGLRETDFGAWEGLTFGE
VRERHPDDLDAWLADPEAHPTGGGESFAETATRIAATRDKLVAAHAGRTVLLVTHVTPIK
TFVRLALGAPPTSLFRMELSAASLSAVAYYADGNASVRLFNDTSHLRP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggagttcatcgtcgaggccgacggcgggtcgcggggcaaccccgggcccgcgggc
tacggggcggtcgtgctcgacggggccacgggtgaggccctgaccgaggccgcggagtac
atcggcgtcgccacgaacaacgtcgccgagtaccgcggcctcctggccggcctccgcgcc
gcccacgccctcgacccgtcggcccgggtccacgtccgcatggactccaagctcgtcatc
gagcagatgtcgggccgctggaagatcaagcaccccgacatgaagccgctggcggcggag
gcgaggtccgtctaccccccggaccaggtcacctacgagtggatcccgcgcgagcggaac
aaacacgcggaccgcttggcgaacgaggcgatggacgcgggggcgaagggccggcagtgg
tcaccgtcgcggtccggcgcggtcctggacaccccgcccgccgtccctgagccgtcgggc
ccacccggagacgcggcggcgggcgcggcgaaggcccgcgcggccctggcggagggccgg
accgccggtgcggcgcccgtcccagaggaggcggcacctcccagcgagcagcgcgccgag
tcccccagcgagcagcaccccacggctcccagcgccgggcaggccccccgcgccgggcaa
gcccccggcgagcagcgccccgaatcccccagcgaagggcgcccctccagctccggtggg
gaaaccgtggacgagcggcgcgtcaccagtgcccccggctggagcgccgcccccgacctg
ggcgcgcccgccaccctcgtcctgctccggcacggcgaaacccccctgaccccccagaaa
cgcttctccggcagcggcggcaccgacccctccctctccgccgcgggccgcgagcaggcg
caccgggtcgccgaggcgctggcgcggcgcggcacgatccaggccatcgttgcctccccc
ctcgcccgcacccgcgagaccgccgagatcgtcgccgcccgcctgaacctggacgtcacg
ctcgacgacggcctgcgcgagacggacttcggcgcctgggagggcctgaccttcggcgag
gtccgcgagcgccacccggacgacctcgacgcctggctcgccgacccggaggcccacccc
accggcggcggcgagagcttcgccgagacggccacccggatcgccgcgacccgcgacaag
ctggtcgcggcccacgcgggccgtacggtcctgctggtcacccacgtcaccccgatcaag
accttcgtccgcctcgcgctcggcgccccgcccacgtcgctgttccggatggagctctcg
gcggcctccctgtcggcggtggcgtactacgcggacggcaacgcgagcgtacggctgttc
aacgacacctcccacctgcgcccctga
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