KEGG   Streptomyces hygroscopicus subsp. jinggangensis 5008: SHJG_p1056
Entry
SHJG_p1056        CDS       T02063                                 
Name
(GenBank) CRISPR-associated Cas5 family protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
shy  Streptomyces hygroscopicus subsp. jinggangensis 5008
Brite
KEGG Orthology (KO) [BR:shy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shy02048]
    SHJG_p1056
Prokaryotic defense system [BR:shy02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    SHJG_p1056
SSDB
Motif
Pfam: Cas_Cas5d DUF1179
Other DBs
NCBI-ProteinID: AEY94187
LinkDB
Position
pSHJG1:complement(43029..43748)
AA seq 239 aa
MSVLTLVLAGPLQAWGASARFARRTTESAPTKSGLIGMLAAAHGIQRGDDAALAQLARLR
FGVRIDQPGTRLRDYQTAQHQITGKSMPVSERYYLADAVFVAAVEGDDTLIDSVDQALRQ
PVYAPYLGRRSCPPARPLRLALHRDIGLAQALQAEPWQASAWFRRQRRRDQTVALSVLRE
ALPGEAGADTLRDQPLSYAAEHRQHALRTIVTSTVNVSNPDADTPPAHDPFTALEEEAL
NT seq 720 nt   +upstreamnt  +downstreamnt
atgagcgtgctcaccctcgtcctggccggccccctgcaggcgtggggggcctcggcccgt
tttgcccgccgcaccaccgagtccgcccccaccaagagcggcctgatcggcatgctcgcc
gccgcccacggcatacagcgcggcgacgacgcagccctcgcccagctcgcccggctgcgc
ttcggcgtacgcatcgaccagcctggcacccgtctgcgcgactaccagaccgcgcagcac
cagatcaccggcaaatcgatgccggtctcggagcgctactacctcgccgacgccgtcttc
gtggccgccgtggaaggcgacgacacgctcatcgacagcgtggaccaagccctgcgccag
cccgtctacgcgccctacctcggccggcgttcctgcccgccggcccgccccctgcgcctc
gccctgcaccgcgacatcggcctggcccaggcgctccaggcggagccctggcaggcctcc
gcctggttccgccgacaacgccgccgcgaccagaccgtggccctgagcgtcctgcgtgag
gcactgcccggtgaagccggcgcggacacgctccgcgaccagcccctcagctacgccgcc
gagcaccgccagcacgctctgcggaccatcgtgaccagcacagtgaacgtgtccaacccc
gacgccgacacgcccccggcccatgacccgttcactgctctggaggaagaagccctctga

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