Sphingobium xenophagum: CJD35_00925
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Entry
CJD35_00925 CDS
T05146
Name
(GenBank) isoleucine--tRNA ligase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
shyd
Sphingobium xenophagum
Pathway
shyd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shyd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CJD35_00925
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shyd01007
]
CJD35_00925
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shyd03016
]
CJD35_00925
Enzymes [BR:
shyd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
CJD35_00925
Amino acid related enzymes [BR:
shyd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CJD35_00925
Transfer RNA biogenesis [BR:
shyd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CJD35_00925
Prokaryotic type
Other AARSs
CJD35_00925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
zf-FPG_IleRS
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ASY43176
UniProt:
A0A249MP81
LinkDB
All DBs
Position
I:complement(182402..185317)
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AA seq
971 aa
AA seq
DB search
MTDAPDYKSTVFLPVTDFPMKAGLAQKEPAIAAKWEAMGLYDRLRERRKGRERFILHDGP
PYANGDIHMGHAMNKVLKDIIVRSQSLLGKDAPYVPGWDCHGLPIEWKIEEEYRKKKLNK
DEVPAAEFRAQCRAYADKWVGVQKEQFKRLGVMGDWADPYLTMKFDAEATIVGELLKFAE
SGQLYRGAKPVMWSPVEKTALAEAEVEYEDVVSTQIDVAFEIVEAPNAPELVGAHAVIWT
TTPWTIPVNQAIAFGEGIEYKLVEETTLPLNDESAPTKTGRRFLVASDLVHAFGERNGWF
ARNTDEEDFGYMSIWTGKGIDLAGAIARHPMHALGGFFARPRPFLPADHVTTDAGTGLVH
MSPDHGEEDFIACKKLGIDPVFAVNDAGFYRDDWEWLPGQGSVINTKFNGADGPICTDLR
AAGALLSASEFRHSYPHSWRSKARIIYRCTPQWFIPMDKPSGQVMDYPLPPLEPVTGALA
TALPTNGPTLRGVALDAIQNTRWVPERSTNRIRSMVEGRPDWVISRQRAWGVPIALYVHR
KSGQYLVDPAVNTRIVEAFKAGGADAWFGADHQALLGPEHDLADYEVITDILDVWFDSGS
THSFVVEARYGEGARADLYIEGSDQHRGWFQSSLLESCGTRGQAPYKAVLTHGFALDGTG
RKMSKSLGNVVDPLKIMGESGADILRVWVASTDYFDDVRIGKEVLAGSSDAYRKLRNTFR
YMLGALSDYDEETEAVSYAEMPELERYMLHRLATLDAELRSVVDKAADSENWLEFSRYTR
ALFDFANSDLSAFFFDIRKDCLYCDAPSDPKRRAYRTLLDTLFHALVRYAAPIIPFTAEE
VWQSRFPSDEESVHFLEWPEIDHHWINAHLDEKWTELRSQREQVNEAIEPLRREKIVRSS
LEADVTMGQVLAVGDVDFAEVAIVARVTMGEGDGISVRPSEWHKCGRCWRLLPEVTEDGA
LCGRCDAVVAP
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcacctgactataagtccaccgttttcctgcccgtcaccgactttccgatg
aaggccggcctggcgcagaaggaacccgcgatcgcggccaagtgggaggcgatgggtctg
tatgaccggctgcgcgagcggcgcaaggggcgcgaacgcttcatcctgcatgacgggccg
ccctacgccaatggcgacatccatatgggccatgcgatgaacaaggtgctcaaggacatc
atcgtccgcagccaatcgctgctgggcaaggatgcgccctatgtgcccggatgggactgc
catggcctgccgatcgaatggaagatcgaggaggagtatcgcaagaagaagctgaacaag
gacgaggtgcccgccgccgagttccgcgcccagtgccgcgcctatgccgacaaatgggtg
ggcgtgcagaaggagcagttcaagcgtctgggcgtgatgggcgactgggccgatccctac
ctgaccatgaagttcgacgccgaagctaccatcgtgggcgagttgctgaaattcgcggaa
agcggccagctgtatcgcggggccaagccggtgatgtggtccccggtcgaaaagaccgcg
ctggccgaggctgaggtggaatatgaggatgtcgtgtcgacgcagatcgacgtggcgttc
gagattgtggaagcgcccaatgcgccggagctggttggcgcgcatgcggtgatctggacg
acgaccccttggacgatcccggtgaaccaggcgatcgcgtttggggaggggatcgagtat
aagctggttgaagagacgacgcttccgttgaacgatgaatcggcgccgacgaagactggt
cgccgttttctcgtagcttcggatttggtgcacgctttcggtgaacgtaacggctggttt
gctcgcaataccgacgaagaagacttcgggtatatgtcgatatggaccggcaaaggcatc
gacctcgccggagccatcgcccgtcatccgatgcacgcgctcggcggcttcttcgcccgt
ccgcgtcccttcctgcccgccgatcatgttaccaccgacgcgggtaccggccttgtccat
atgtcccccgatcatggcgaggaggatttcatcgcctgcaagaagctgggcatcgacccg
gtctttgcggtcaatgatgctggtttctatcgcgacgattgggaatggttgccggggcag
ggcagcgtcatcaataccaagttcaacggtgcggacggcccgatctgcactgacctgcgc
gcggctggcgcgctgctgtcggccagcgagttcaggcatagctatccccatagctggcgg
tcgaaggcgcggatcatctatcgctgcacgccgcaatggttcattccgatggacaagccg
agcgggcaggtgatggactatccgctgccgccgctggagccggtcaccggcgcgctggcg
acggcgctgccgaccaacgggccgacgctgcgcggcgtggcgctcgatgcgatccagaac
acccgctgggtgccggagcgctcgaccaaccgtatccggtccatggtcgaagggcgtccc
gactgggtgatcagccgccagcgcgcctggggcgtgccgatcgcgctctatgtgcatcgc
aagagtgggcagtatctggttgatccggcggtcaatacccgcatcgtcgaagcgttcaag
gcgggcggcgcggatgcctggttcggggcggatcatcaggcgctgctggggccggagcat
gatctggccgactatgaggtcatcaccgacattctcgatgtgtggttcgattccgggtcg
acccacagtttcgtggtggaggcccgctatggcgagggcgcgcgcgccgacctgtatatc
gaagggtctgaccagcatcgcggctggttccagtcatcgctgctcgaaagctgcggcacg
cgcggacaggcaccgtacaaggcagtgctgacccatggcttcgcgctcgacgggaccggg
cgcaaaatgtccaagagccttggcaatgttgtcgatccgctcaagatcatgggcgaaagc
ggcgcggacatattgcgcgtatgggtcgcgagcaccgactatttcgacgatgtgcggatc
ggcaaggaagtgttggccggatcgtccgacgcctatcgcaaattgcgcaatactttccgg
tacatgctgggcgctctttccgattatgatgaagagaccgaagccgtgtcctacgccgaa
atgccggagctggagcgctatatgctccaccggctggcgacgctggacgcggaattgcgc
agcgttgtcgacaaggcggcggacagcgagaattggctggaattcagccgctatacccgc
gcgctgttcgatttcgccaatagcgacctgtcggccttcttcttcgacattcgcaaggac
tgcctctattgcgacgcgccgtcggaccccaagcgccgcgcctatcgcacattgctggat
acgctgttccacgcgctggtccgctatgccgcgccgatcatccccttcaccgcggaggaa
gtatggcaaagccgcttcccaagtgacgaggaaagcgtgcattttctggaatggccggag
atcgaccatcactggatcaacgcgcatctggacgagaaatggaccgagttgcgcagccag
cgcgaacaggtgaacgaggcgatcgagccgttgcggcgcgagaagatcgtgcgttccagc
ctggaggccgatgtcaccatggggcaggtgctggccgtgggcgacgtcgatttcgccgaa
gtggcgatcgtcgcgcgggtgacgatgggcgagggcgacggcatcagcgtccgtcccagc
gaatggcacaagtgcggccgttgctggcgcttgctgcccgaagtcaccgaggatggcgcg
ctgtgtggccggtgtgacgcggttgttgcgccatga
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