Candidatus Sulfidibacterium hydrothermale: LA303_00650
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Entry
LA303_00650 CDS
T07944
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr01501
beta-Lactam resistance
shyr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LA303_00650
01503 Cationic antimicrobial peptide (CAMP) resistance
LA303_00650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyr02000
]
LA303_00650
01504 Antimicrobial resistance genes [BR:
shyr01504
]
LA303_00650
Transporters [BR:
shyr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LA303_00650
Antimicrobial resistance genes [BR:
shyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LA303_00650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Phage_tail_3
Motif
Other DBs
NCBI-ProteinID:
UBM62505
LinkDB
All DBs
Position
166301..169402
Genome browser
AA seq
1033 aa
AA seq
DB search
MNITELSIKRPSLIVVLFGVFILLGVIGFSNLSYELLPDFSQPVVVIKTMYPGAEPHEVE
NTVSRKLEDALSNLEGIDYMETYSLPNASVIIVNLKYGTNLDNTMQNAQRYIDNIKNDLP
DDILSPQMSKVSPNDLPIMSISATSNLPATVFYQKMKDDFLPQIQQLNGVAEITMLGGEQ
REILVKVDQKKLKLYKVSLLQVVEAIKQSDIDIPSGDVKTDKEYHSVRLIGKFKNISQIM
NVQVAMPSPGNPVYVKDVASVVDGVKEITSVSRYNGVNGIGILLKKQGDANAVDVSRLVR
KKLKQIEKEYAKYNVKFKIADDSTTNTIAAVNSVVDDLILAVILVSVVMLLFLRSYRNSI
IVLIAIPTSLVTAFAMMWILGYTLNLMTLLAMSLIIGILVDDSIVIIENIQRHLDMGKDK
REAALEGRMEIGFSAVSITLVDVVVFAPILFLHVFVAGMLKQFSVVVITSTLTSLLVGFT
LTPWLASRIGKKEDLKPTNPLNRFLLWFEDQLQRFIEWYGHQLEWVLNHKLIFTGIVLFL
FLLTGLIMKQGIIGEEMMSTGDQGKFSLNLEFDKTTTVHKNNIISQKVENYILSQPEVST
LFSNIAGPSTGIGSLGIGSPYISEFTIQLKPLKERKMSTIAYMKWLKKELNKRYPGINFS
MSELGLIPRSAPIKITLSGSDLNVVMKTAKDLQDAVEKIPGADNVRLSVEEGNPEYKVIP
DKDKMKRLGLSTAYVGLSLRTAFKGNDDATLVQKGTEYPIEIRLDNFDRRNYEDVKNLIV
VNPMHVPVRVSQFAKVVQDNSPSMLERINRQPAITLTSEAFGRPSGTLASDVVKYLKKHP
LPEGIKLTWESDVKTQNESFGALSSVMLISFILIYLIMVALYDNYVYPFVALFGIPVAVI
GAFLALNLSLNNITLFALLGMIMLMGLVTKNAILIVDFTNHLKAQGKHYKEALILAGKER
MRPILMTTLAMTIGMLPIALAKGTASEWKNGLAWVIIGGLLSSLMLTVYLVPMVYYLVDR
TKEKFGKKKIKQD
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaatattacagaattatccataaaacgaccctcgctgatcgtggttttgtttggcgta
ttcattttgctgggcgtcattggcttcagtaatttgagttacgaactgttgcccgatttc
agccagccggtggtggtaatcaaaaccatgtatcccggtgccgaaccccacgaagtagaa
aataccgtatcccgaaaactggaagatgccctgtcgaatctcgaagggatcgactacatg
gaaacctactcgttgcctaatgcttcggtaattattgtcaacctgaaatacggtaccaac
ctcgataataccatgcaaaatgcccagcggtatatcgacaacatcaaaaacgacctgccg
gatgatattttgagtccgcagatgagtaaggtttcgcccaacgacttgccgattatgtcc
atcagtgccaccagtaacctgccggctactgttttctatcagaaaatgaaagatgatttt
ctgcctcagattcagcagttgaacggggtagccgaaatcacgatgcttggtggtgagcaa
cgcgaaattctcgtgaaagtagaccagaaaaagctgaagctttataaagtttcgctgttg
caggtggtcgaagccattaaacaatcggatatcgacattccttcgggcgatgtaaaaacc
gataaagagtatcactcggttcgtctgatcggaaaattcaaaaatatcagtcagattatg
aacgtgcaggtggccatgccctcacccggtaacccggtatatgtgaaagatgtggcttcg
gtagtggacggagtaaaagaaattacttcggtcagccgctacaacggcgtaaacggaatc
gggattttgctgaagaagcagggcgatgccaatgccgtggacgtatcgcgactggtacgt
aaaaaactgaaacagatcgaaaaagagtacgccaagtacaacgtaaaattcaaaattgcc
gacgactcgaccaccaacaccattgccgctgtaaattcggtggtggacgacctgattttg
gccgttattcttgtgtcggtggtgatgttgctgttcttacgcagttatcggaactctatc
atcgtattgattgccattcctacttcgctggttacggctttcgccatgatgtggattctc
ggctatacgctgaaccttatgacgttgctggccatgtcgttgattatcggtattttggtg
gatgactcgattgtgattatcgaaaatatccagcgtcacctcgacatgggaaaagacaaa
cgcgaagcggctctcgaaggccgaatggaaattggtttttctgctgtttccattaccctt
gtggacgtggtggtgtttgctcctattttgtttttgcacgtctttgtggccggtatgctg
aaacagttttcggtggttgttattacctctacgctcaccagtttgctggtaggttttacg
ctgaccccgtggcttgcttcacgtatcgggaaaaaagaagacctgaaacctaccaatccg
ctcaaccgctttttgctttggttcgaagaccagcttcaacgttttattgaatggtacgga
caccagcttgagtgggtattgaaccacaagctgatttttactggcattgttttgttcctg
ttcctgctgaccggccttatcatgaaacagggaattatcggggaagagatgatgtccacg
ggcgaccagggtaaattcagcctgaaccttgagtttgacaaaaccacaacggttcataaa
aacaatatcatcagccaaaaggttgaaaattacattctgagtcagcccgaagtatccaca
ctctttagtaacattgccggtcccagtaccggaatcggaagtcttggtatcggctcgcca
tatatttcggaatttaccattcagcttaaaccgttgaaagagcgcaaaatgtcaaccatt
gcttatatgaaatggctgaaaaaagagctcaacaagcggtatcccggcattaacttttcc
atgtctgaactgggacttatcccgcgttcggcgcctattaaaattaccttgagcgggagt
gacctgaatgtggtaatgaaaacggccaaagacttgcaggatgctgttgaaaaaattccg
ggagctgacaatgtccgcctgtcggtggaagaaggaaacccggagtacaaggtgattccc
gacaaagacaaaatgaaacgtcttggtttgtccactgcttatgtcggactgtcgctgaga
actgcttttaaaggaaacgacgatgctaccctcgtacaaaaaggaactgaatatcccatc
gaaatccggttggataacttcgaccgccggaattacgaagatgtgaaaaatctgatcgtg
gtcaatcccatgcatgttcctgtcagggtatcgcagtttgccaaagtggtacaggacaac
tcgccttcgatgttggaacggatcaaccgtcagccggccattacgctgacttcggaagct
ttcggaagaccatccggaacactggcttccgatgtggtaaaatacctgaaaaaacacccg
ttgcccgaaggaattaaactcacctgggaatcggatgtgaaaacgcaaaatgaaagtttc
ggtgcgctgagttccgtaatgcttatttcgtttattctgatttacctcatcatggttgcg
ctgtacgacaattacgtttatccatttgtagctttgtttggtattccagtggctgttatt
ggtgctttccttgccctgaacctgtcgctgaacaacattaccctgtttgctctgctcggt
atgattatgttgatggggctggtaaccaaaaacgccattttgattgtggactttaccaac
cacctgaaagcgcagggaaaacattataaagaagcgctgattctggctggtaaagaacgt
atgcgtcctattttgatgaccacactggccatgaccattggtatgctgccgattgcgctg
gccaaaggaaccgccagtgaatggaaaaacggtctggcatgggtaattatcggcggattg
ctttcttcgctgatgcttacggtttatcttgttccgatggtttactatcttgtggaccgg
accaaagaaaaatttggtaaaaagaaaataaaacaagattaa
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