Candidatus Sulfidibacterium hydrothermale: LA303_01880
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Entry
LA303_01880 CDS
T07944
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr01501
beta-Lactam resistance
shyr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LA303_01880
01503 Cationic antimicrobial peptide (CAMP) resistance
LA303_01880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyr02000
]
LA303_01880
01504 Antimicrobial resistance genes [BR:
shyr01504
]
LA303_01880
Transporters [BR:
shyr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LA303_01880
Antimicrobial resistance genes [BR:
shyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LA303_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UBM62742
LinkDB
All DBs
Position
complement(496430..499615)
Genome browser
AA seq
1061 aa
AA seq
DB search
MGNFFVRRPIVAMVIAIIMVIVGVISLISLPMEQYPNITPPVVEVLGTYTGANAVSVEQS
VATPIEQEMNGVENMIYMKSTNSNDGTMRLQISFEVGSNPDMATVFAQNRVSAATAKLPQ
EVTRFGVTTKKMLPNTILLVTLTSDGRYDQDFLGNYALINIKDVLARIKGIGNVNVLGAA
DYSMRIWVKPDRLAQLGITINEIKNAINEQSKIIPGGKFGAEPAPPGTEFTYTVRLPDRL
VSVKQFKNIIVRTNPDGSQVKLQDIAHVELGVEKYLAFTRVNGKQCAIISLYQQPGSNAV
ELAKEVRKTMQHLAKKFPAGIQWQVSMDATKPISAGIKEIVITLFVALFLVILVVFIFIQ
DWRATLIPTIAIPVSLVGAFMLFPMLGFTINTLSLLGLVLAIGIVVDDAIVVVEAVQVKI
ESGMNSKEATIAAMKEVTAPVIATTLVLVAVFIPVASMGGITGRLYQQFAITIAVSVVFS
SINALTLSPALCSILLRKQQPMGGLLGKFFSWFNRVLDKTTKGYLKYTEKVTQNLKRSVI
FIVILTLGIVLVGKFIPGGFIPEEDMSYFFVNIQLPDAASLQRSNAITKKVEAILNEHRD
VISYVTSAAGYSMLSGAMAPNSGFIFVSMKDWDKRDITVNQFVYQINREFHQKIKGAQVF
AFGPPAIPGLGNGSGFSLMLQDKGGNTPAYLAKQAQKFIAAAKKRPEIGSIFTTYQANVP
QKYLKINKDLALKAGVNLNDLYSTIGAFLGGTYVNDFNRFGRLYKTFIQAEPQYRVKQQD
LNLFFVKNKEGKNVPLSSLVTVKDTTGPDYTIRYNLYRAVELTGQPAEGYSSAQAMSALE
EVAQKVLPKDMGYEWSNMSYQEKKASGSGNVVFIFALIFVFLILAAQYESWSLPFSILLG
TPFAVFGAMLFILFARIISTSYENNVFMQISLVMLIAMAAKNAILIVEFANMEFEKGLSL
FDAAMKAAKLRFRPILMTAFSFILGVLPLVVATGAGAEARKVMGVALLGGMTVATFLGVF
MYPMLFVLIGKLAGYEKKRDKMKAAEITSNAADEQSLPGKD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatttctttgtcagacggcccatagtggccatggttattgccattataatggtc
atcgtgggtgttatttcattgatcagcctgccgatggagcaatatccgaacatcacccct
ccggtagtggaagtgttgggaacttatacaggtgccaatgcggtgagtgtggaacaatcg
gttgccacgcccattgagcaggagatgaatggtgtagaaaatatgatctacatgaaatcg
accaactccaatgacggaaccatgcggttgcagatttcttttgaagtaggttctaatccg
gatatggctaccgtatttgcacaaaaccgggtatcggcagctactgccaaactgccacag
gaagtcacccggtttggtgtaactaccaaaaaaatgctgcctaataccattttactggtt
actttgacttccgacggccggtacgaccaggactttttgggaaactacgccctgatcaac
attaaagatgtactggcacgtattaaaggtatcggaaatgttaatgtattgggagcagcc
gattattctatgcgaatttgggtaaaacccgaccgcctggcgcagttgggaattaccatc
aacgaaattaaaaatgccattaacgaacagagtaaaattattccgggtggaaaattcggt
gccgaacctgctccccccggaacagagtttacctatacagttcgccttcccgaccggctt
gtttcggtaaaacagtttaagaacattattgtccgtaccaatcctgatggttcacaggta
aaacttcaggatattgcccacgtggagctcggggtcgaaaaataccttgcctttacccgg
gtaaacggaaaacagtgtgccatcatttctttgtaccagcaaccgggctccaatgccgtg
gagctggccaaagaagtacgcaaaaccatgcagcatctggctaaaaaattcccggccggt
atccagtggcaggtttccatggatgctacaaaaccgatctcagcaggaatcaaagaaatt
gtgatcacgctttttgtggcgcttttcctggtgattctggtggttttcatttttattcag
gactggcgggctacattgattcctactattgctattccggtatcacttgtgggggcattt
atgttgttcccgatgctgggtttcaccattaacactttgtcgcttttagggctggtattg
gccatcggaattgtggtggatgatgccattgtggtggtagaagctgtacaggtgaaaatt
gaaagcggaatgaactccaaagaggctaccattgcagccatgaaggaggtaacggctccg
gtaattgccaccacactggtattggttgctgtttttattccggtagccagtatgggaggc
atcaccggcagactgtaccagcaatttgccattaccattgctgtttctgtggtgttttct
tccataaatgctttaacactcagcccggcactttgttccattttgcttcgcaaacaacaa
ccgatgggtggcctgctgggaaaattctttagctggtttaaccgtgtccttgacaaaaca
accaaaggatatctcaaatacacagaaaaagtcactcaaaaccttaaacgcagtgtcatt
ttcattgttattcttactttgggtattgtattggttgggaaattcattccgggcggattt
attccggaagaagacatgagctatttctttgtcaacattcaacttcctgatgcggcatcg
ctgcagcgttccaacgcaatcaccaaaaaagtggaagctattttgaacgaacaccgcgat
gtcattagctatgtcacctctgctgccggatacagtatgctttccggtgctatggctcct
aactccggatttatttttgtgagcatgaaagactgggacaaacgggatattaccgttaac
cagtttgtttatcagattaaccgcgagtttcatcaaaaaataaaaggagcacaggttttt
gcttttggtccgccggctattcccggtttgggaaacggctccggattcagtctgatgttg
caggacaaaggcggaaacacaccggcttatttggccaaacaggcacaaaagtttattgct
gctgccaaaaaacgtccggaaatcggctctatttttaccacataccaggctaatgtcccg
cagaaatacctgaaaatcaataaagatctggcattaaaagccggtgtgaatctgaatgat
ttgtattcgactatcggtgcttttctggggggaacttacgtgaatgattttaaccggttt
ggccggttgtacaaaacatttattcaggccgaaccccagtatcgcgtaaaacaacaggat
ctgaatctgttttttgtaaagaacaaagaaggcaaaaatgttcctctttcatcactggtc
accgtaaaagacactaccgggccggattacaccattcggtacaatctgtatcgggccgtg
gaacttaccggtcagcctgccgaaggctattcatcagcacaagccatgagtgccctggaa
gaagtagcccagaaagttcttcccaaagacatgggttatgagtggtcgaacatgtcgtat
caggagaagaaagccagtggctcaggaaatgtcgtctttatttttgctttgatctttgtc
ttcctgattttggcagcgcaatacgaaagctggtcgttgccgtttagcattttgctcgga
acaccgtttgctgttttcggagccatgttgttcattttgtttgcccggatcatcagcacc
agttacgaaaacaatgtgttcatgcaaatttcgctggtgatgctgattgccatggcggcg
aaaaatgccattttgattgtagagtttgccaacatggaatttgaaaaaggactgagcctt
tttgatgccgccatgaaagcagccaaactccgttttcgtccgatcctgatgacggctttt
tctttcatccttggtgtattgccgcttgtggtagccaccggtgccggtgctgaagcccgg
aaagtaatgggagttgcgctgctgggcggaatgaccgttgctactttccttggagttttc
atgtatcccatgctttttgtactgattggcaaactggccgggtatgagaaaaaacgggat
aaaatgaaagccgccgaaatcacttcaaatgcggccgatgaacaatcgttgcccggaaaa
gattaa
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