Candidatus Sulfidibacterium hydrothermale: LA303_01885
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Entry
LA303_01885 CDS
T07944
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr01501
beta-Lactam resistance
shyr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LA303_01885
01503 Cationic antimicrobial peptide (CAMP) resistance
LA303_01885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shyr03036
]
LA303_01885
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyr02000
]
LA303_01885
01504 Antimicrobial resistance genes [BR:
shyr01504
]
LA303_01885
Chromosome and associated proteins [BR:
shyr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LA303_01885
Transporters [BR:
shyr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LA303_01885
Antimicrobial resistance genes [BR:
shyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LA303_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
YknX_C
RND-MFP_C
HH_EMRA
CzcB_C
Beta-barrel_RND_2
BSH_CzcB
BSH_CusB
HH_YBHG
BSH_YknX
Biotin_lipoyl
Ribosomal_S4e
DUF1344
Motif
Other DBs
NCBI-ProteinID:
UBM62743
LinkDB
All DBs
Position
complement(499618..500808)
Genome browser
AA seq
396 aa
AA seq
DB search
MKKFTFRLFSLASIAFMLIFTASCGSKKKATPPPPKIPVVAVLQHNVPIYKEFVGQVYGE
MDIPIRARVSGFLEGIYFQEGRRVKKGQLLYKIDPQPYQAKVAQEMSKLAEAKTSFVKAQ
SDLERIEPLAKMNAVSKSDLDAAKAQYDAAKAYVEAAQASVRLAKIQLGYCSIYSPINGI
IGKTNAKVGEFVGQNPNPVILNTVSKIKQVSVDFYLPESDYLSLARSYRADSAKMEKVRK
RGETKGSLQLILSDGSTYKYPGKVDFINRQVDPTTGTILIQATFPNPDKVLRPGLFARVK
ARIYVDTNALLIPQRCIQETQGKSSVFVVQDSVIRFVSVETGPTVGDMWIIKKGLKNGDH
VVLEGLQYVKDGMKVIPELKTFQSQSKVVKQLLNNQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttacatttcgtttatttagcctggcatcaatagctttcatgctgattttc
accgcttcctgcggaagtaaaaagaaagcgactccgcctcctccaaaaattcctgttgtt
gctgttttacaacacaacgttcccatttacaaagagtttgtgggacaagtttacggtgaa
atggatattcccatccgtgcccgggtttccggtttccttgaaggaatttatttccaagaa
ggccggcgggtaaaaaaaggacagttactgtacaaaattgaccctcaaccttatcaggcc
aaagttgctcaggagatgagcaaactggcagaggccaaaacatctttcgtaaaagcccag
agcgatctggaacgaatagaacctttggccaaaatgaacgccgtgagtaaaagtgacctg
gatgcggccaaagcccagtatgatgcggccaaagcgtatgtagaagccgctcaggccagc
gtaagactggctaaaatccagttgggttattgctctatttactcgccaataaatggtatt
atcggaaaaaccaatgccaaagtgggcgaatttgtaggacaaaatcccaacccggtgatt
ttgaataccgtatcaaaaatcaaacaggtaagtgtggatttctatttgcccgaatccgat
tatttgtcactggcacgaagttatcgcgctgattcggcgaaaatggaaaaagtacggaaa
agaggagaaaccaaaggaagcctgcagctgatcctgtccgatgggtctacttataaatat
cccggaaaagtagattttatcaaccggcaggttgatcctaccaccggaacgattttaatt
caggctactttccccaatccggacaaggtacttcgtccgggactttttgcccgcgtaaaa
gcccgcatttatgttgataccaatgcgttactgattccgcaacgttgtatccaagaaacc
cagggaaaatcaagcgtttttgtggtacaagacagtgtgatccgttttgtttcggtggaa
accggtccgacagtgggtgatatgtggatcatcaaaaaaggcctgaaaaatggagatcat
gtggtgctggaagggctccaatatgtgaaagacggaatgaaagtaattcctgaattaaaa
accttccaatcgcaatcaaaagtcgttaaacaacttcttaataaccaatag
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