Candidatus Sulfidibacterium hydrothermale: LA303_05450
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Entry
LA303_05450 CDS
T07944
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
shyr
Candidatus Sulfidibacterium hydrothermale
Pathway
shyr01501
beta-Lactam resistance
shyr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shyr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LA303_05450
01503 Cationic antimicrobial peptide (CAMP) resistance
LA303_05450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shyr02000
]
LA303_05450
01504 Antimicrobial resistance genes [BR:
shyr01504
]
LA303_05450
Transporters [BR:
shyr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LA303_05450
Antimicrobial resistance genes [BR:
shyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LA303_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6286
Motif
Other DBs
NCBI-ProteinID:
UBM63411
LinkDB
All DBs
Position
1391736..1394765
Genome browser
AA seq
1009 aa
AA seq
DB search
MNKLSEFAVENRRAIIFTTLLLSLIGGYLLFRIPEGVFPDATFPRIAIEVDYGLAPLKEM
EMRVAKPIEEAMMMVEGVRTVRASISRGALEVNVDFQWGQDMFRAYQLVQAQVSGIQHQL
PPGVKIEVRRFTTSTYPVAGFALTSDKRNLLQLRDLAIFTIRPQLAAIPGVYNIEVMGGH
QREYWVNLDPQKLVALHLDYKKVEKAIRQANNLQFVGRLNESNKLYLNIADNRFVKMEDI
EKTIVAHRGVQPVFLSDIATVKPAVKETFIACESNLKPAVLITVIKQPGTNAVSIMKTVE
KRLASLKKVMPPDVRIQKWYDMTDFIRGAIGSVRDAIFLGAFLTFLILLLFLKKLRITLV
TVTIIPVALLISFIFIKLSGMNLNIMSLGGLAAAIGILTDNAIVVIENVERYLEEGFGRK
EAVIRATSEIIPPLLGATLTTLVVFVPLVFLSGVPGIFFKALASTLAIAVVVSMLLAVFL
TPALTVSFISTRKKKPGKFMPVLVNLQQKALKGLMRWPVVTLLVVLIFAAVAVFSYLRIP
NGFLPEWDEGTIVHDYLAPPGSSIEATKKMLKPIAQYIMSLPDVESYSLRTGRSLAHPRT
HTNDGDFVIMLKKGHKLSSFEIMDKIRAFDRTHEPRLQPELFQVLPDRLKDLSGEIAPIT
IKVFGENLALIRQTAAQIADSLKNIRGAVDVYKGFSKTEPELRIRVNEEAAARFGVSVKE
VSDAVHMALWGDDVSGIMEGLKMIPVRVRYPKQKYLHAEAIKKLPVYLASINRVVRLGEI
ADIQKLPGKADVDHENLAQVVNVKAHIAHRDLGSIIRDVKTMLAHIPLPPGVTLDIGGQY
KSQQEAFRQLIMILSLGILLVFAILLFEFKSFRTSGVILLGTVLSVSGVFLLLWITRIPL
DISAFMGMIMIIGVVVNNGILLIDYTEKYLKENSDVQQALLMAGQVRMRPILMTMLATIF
GFLPLALALGEGSEMLQPLAVSMIGGMMLSIFLSLLIIPALYWMVNRNR
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaattatcagaatttgcggtagagaacagacgggcgattatttttactacgctt
ttgttgtcgcttattggcgggtatttgctgtttcgtattcccgaaggcgtattcccggat
gccactttcccgcgcattgccattgaagtggattacggactggctccgttgaaagagatg
gaaatgcgggtggccaaaccgattgaagaagcgatgatgatggttgaaggcgtgcggaca
gtacgggcttccatcagtcgtggggcgttggaagtcaatgtggattttcaatggggacag
gatatgtttcgggcttaccagctggtgcaggcgcaggtgagtggtattcagcatcagctt
ccgcccggagtgaaaattgaagtccgccgttttaccaccagcacttatcctgtggccggc
tttgcgttgacttccgataaacggaacctgttacaactgcgcgatttggccatctttacc
attcgcccccagctggctgctattccgggcgtgtacaatattgaagtgatgggcggacac
cagcgggagtattgggtgaatctggatccacaaaagctggtcgctttgcacctcgattat
aaaaaggtggaaaaagccattcgccaggccaacaatttgcagtttgtgggacggctgaac
gagtcgaacaagctttatctgaacattgccgacaaccgttttgtaaaaatggaggatatc
gaaaaaaccattgtagcccatcgcggagtgcaaccggttttcttgtccgatattgctacg
gtgaaaccggccgtaaaagagacttttattgcctgcgaaagtaacctgaaaccggccgtg
ttgataacggtgattaaacaaccggggaccaatgccgtttccattatgaaaacggtggag
aaacggttggcttcactgaaaaaagtcatgccgcccgatgttcgtattcaaaaatggtac
gacatgaccgattttatccggggagccatcggcagtgtccgcgatgcgatttttctggga
gcatttcttacattcctcattctcctgctctttttgaagaaattacggattacgctggta
acggtgaccatcattccggtagcactgctcatcagctttatttttataaagttgtcaggg
atgaacctgaatattatgagtttgggcggactggcagcagctatcggtattttgaccgat
aatgccatcgtggtgatcgaaaatgtagaacgctaccttgaagaaggtttcgggcggaaa
gaagcggtgattcgtgctacttcggaaattattccgccgttgcttggtgctacattgacc
acgttggtggtttttgtcccgctggtttttctttccggggttcccggcatcttttttaag
gcactggcttccacattggctattgcggtggtggtatccatgttgctggcggtattttta
accccggcactcacggtcagttttatttctacccggaagaaaaaaccgggaaagtttatg
ccggtactggtaaatcttcagcaaaaagcattaaaggggttgatgcggtggcctgttgtt
acccttttggtggtgttgatttttgctgcggtggcggttttttcttacctgcgtattcca
aatggttttttgcctgaatgggacgaaggaaccatcgtgcatgattatctggctccgccg
ggtagctccatcgaagcaaccaaaaaaatgctgaaacctatagcgcaatacattatgagc
ttgcccgatgtggagagttattcgctccgtaccggccgtagtctggcacatccccgaacc
cacaccaacgatggcgattttgtgatcatgctgaaaaaaggacataagctctcgtctttc
gaaattatggataaaatcagggcttttgaccgtacgcatgaaccacggttgcaacccgaa
ttgttccaggtgttgcctgaccgcctgaaagacctgagcggagaaattgctcccattacc
atcaaagtttttggcgaaaacctggctcttatccggcagacggcagcacaaattgctgat
tccctgaaaaatatccgtggcgcagtggatgtgtacaaagggttttcaaaaacagaaccg
gagttacggattcgggtaaatgaagaagcggctgcccgtttcggcgtgagtgtaaaagaa
gtaagcgatgccgtgcatatggcgctttggggcgacgatgtgtcgggtatcatggaagga
ctgaaaatgatccccgtccgggtgcgttatcccaaacaaaaatatcttcatgctgaagcc
atcaaaaagttaccggtttacctggcatccatcaaccgggttgtccggttgggtgaaatt
gccgatattcagaaattgccgggaaaagccgatgtggaccacgaaaaccttgcgcaggtg
gttaatgtaaaagcccatatagcgcaccgtgatttagggagtattatccgtgatgtgaaa
accatgcttgcccacattcctttgccgccgggtgttacacttgacattggcgggcagtac
aaaagccagcaggaagctttccggcagctcatcatgatcctttctttgggcattttgctg
gtttttgccattttgttgttcgaattcaagtcttttcgtacttccggagtgatcttgctg
ggtacggtattatcggttagcggtgttttccttctgttatggattacccgtattccgctg
gatatttctgcttttatgggaatgattatgattattggcgtggtggtgaataacggcatt
ttactgatcgattataccgaaaaatatttaaaggaaaattctgatgtccaacaggcactg
ctcatggccggacaagtgcgtatgcgtcccatcctgatgaccatgctggccaccattttt
ggctttttgccgttggcactggccctgggcgaaggttctgagatgctgcaaccccttgcc
gtatccatgattggcggcatgatgctttctatttttctctcccttttgattattccggct
ttgtattggatggtgaaccggaaccggtaa
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