Shinella sp. HZN7: shn_18625
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Entry
shn_18625 CDS
T04278
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
shz
Shinella sp. HZN7
Pathway
shz00020
Citrate cycle (TCA cycle)
shz00785
Lipoic acid metabolism
shz01100
Metabolic pathways
shz01110
Biosynthesis of secondary metabolites
shz01120
Microbial metabolism in diverse environments
shz01200
Carbon metabolism
shz01210
2-Oxocarboxylic acid metabolism
Module
shz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
shn_18625
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
shn_18625
Enzymes [BR:
shz01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
shn_18625
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ANH05848
UniProt:
A0A1A9G5P7
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All DBs
Position
complement(3855032..3858028)
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AA seq
998 aa
AA seq
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MARQDANEQFLATSFLDGANAAYIEQLYAKYEADPASLGEEWQAFFKALEDQPSDIVKAA
KGASWKRANWPIAANGELVSALDGNWGIVEKVLEKKVQAKAEAVAAQTGTPVNQADVNQA
TRDSVRAIMMIRAYRARGHLHAKLDPLGLAVPVEDYNELSPSNYGFEEKDLDRKIFIDNV
LGLEYASVREMVEILERTYCSTIGVEFMHISNPEEKGWIQERIEGPDKGVDFTPEGKKAI
LQKLIEAEGFEQFIDVKYKGTKRFGLDGGESLIPALEQIIKRGGQLGLKEIVLGMAHRGR
LNVLTNVMAKPHRAVFHEFKGGSYAPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQMATVFEGDIIPLRERVKVMPLLLHGDAAFAGQGVVAEILG
LSGLRGHRVAGTVHVIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVTY
AAKVATEFRMKFHKPVVLDIFCYRRFGHNEGDEPAFTQPKMYKAIRAHKTVVNLYGSRLI
GEGVISEGEFEKMKADWRANLEQEFEAGQSYKPNKADWLDGAWSGLRSADNQDEQRRGKT
SVPMKQLKEIGRKIATIPEGFKAHKTIQRFMDNRLQMVETGEGIDWAMAEALAFGTLCVE
GTKIRLSGQDCERGTFSQRHSVLYDQETEDRYIPLANLSPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERWLQMCAEDNMQVANVTTPANYFHILRRQVKRDFRKPLIMMTPKSLLRHKRA
VSSLSEMAGESSFHRLLWDDAEVIKDGPIKLQKDAKIRRVVMCSGKVYYDLLEEREKRGI
DDVYLLRLEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGGWAFIDPYLEWVLAHIDA
KYQRVRYTGRPAAASPATGLMSKHMAQLAAFLEDALGG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcaagacgccaacgaacaattcctggccacgtccttcctcgacggggcgaac
gcagcctatatcgagcagctctacgcgaagtacgaggccgatcccgcctcgctcggtgag
gaatggcaggccttcttcaaggccctcgaagaccagccctccgacatcgtgaaggccgcc
aagggtgcctcctggaaacgcgcgaactggcccatcgcggccaatggcgagctcgtctcg
gcgctcgacggcaactggggcattgtcgagaaggtcctggaaaagaaggtgcaggcaaag
gccgaggccgttgcggcccagaccggcacgcccgtcaaccaggccgacgtcaaccaggcg
acgcgcgattccgtgcgcgccatcatgatgatccgcgcctaccgcgcgcgcggccacctg
cacgccaagctcgatccgctcggccttgccgttcccgtcgaggactataacgagctttcg
ccctcgaactacggtttcgaggagaaggatctcgaccgcaagatcttcatcgacaacgtg
ctcggcctcgaatatgcgagcgtgcgcgaaatggtcgagatcctggagcgcacctattgc
tcgacgatcggcgtcgagttcatgcacatctccaacccggaagagaagggctggatccag
gagcgcatcgagggcccggacaagggcgtcgacttcacgcccgagggcaagaaggcgatc
ctgcagaagctgatcgaggcggaaggcttcgagcagttcatcgacgtcaagtacaagggc
accaagcgcttcggcctcgatggcggcgagtccctcatcccggcgctggagcagatcatc
aagcgcggcggccagctcggcctcaaggaaatcgtgctcggcatggcccaccgcggccgc
ctcaacgtgctcaccaacgtgatggccaagccccatcgcgccgtcttccacgagttcaag
ggcggctcctacgcgccggacgacgtggaaggctcgggcgacgtgaagtaccatctcggc
gcctcctcggaccgcgagttcgacggcaacaaggtgcacctgtcgttgaccgccaacccc
tcgcaccttgaaatcgtcaacccggtcgtcatgggcaaggcccgagccaagcaggaccag
atggcgaccgtcttcgagggcgacatcattccgctgcgcgagcgcgtcaaggtcatgccg
ctgctgctgcatggcgatgctgccttcgcgggccagggtgtcgttgccgaaatcctcggc
ctgtcgggcctgcgcggccaccgcgtcgccggcacggtgcatgtcatcatcaacaaccag
atcggtttcaccacgaacccggccttctcgcgctcctcgccctatccgtcggatgtggcg
aagatgatcgaggcgccgatcttccatgtgaacggcgacgatccggaagcggtgacctat
gccgcgaaggtcgcgaccgaattccgcatgaagttccacaagcccgtcgtgctggatatc
ttctgctatcgccgcttcggccacaacgaaggcgacgagccggcgttcacccagccgaag
atgtacaaggcgatccgcgcgcacaagaccgtggtcaacctctatggttcgcgcctcatc
ggcgagggcgtgataagcgagggcgagttcgagaagatgaaggccgactggcgcgccaat
ctcgaacaggaattcgaggccggccagtcctacaagccgaacaaggccgactggctggac
ggcgcctggtcgggcctgcgctcggccgacaaccaggacgaacagcgtcgcggcaagacc
tccgtgccgatgaagcagctcaaggagatcggccgcaagatcgcgacgatcccggaaggc
ttcaaggcgcacaagaccatccagcggttcatggacaaccgcttgcagatggtcgagacg
ggcgagggcatcgactgggcgatggcggaagcgctggccttcggcacgctctgtgtcgag
ggcacgaagatccgcctgtccggccaggattgcgaacgcggcaccttctcgcagcgccac
tcggtgctctacgaccaggagaccgaggaccgctacatcccgctcgccaacctctcgccg
acccaggcgcgctacgaggtcatcaactcgatgctctcggaagaagcggtgctcggtttc
gaatacggctattcgctggcccgtccgaacgcgctgaccctctgggaagcccagttcggc
gacttcgccaacggtgcgcaggtcgtcttcgaccagttcatctcgtcgggcgaacgcaag
tggctgcgcatgtccggcctcgtctgcctcttgccgcacggctatgaaggccagggtccg
gaacactcctccgcccgcctcgaacgctggctgcagatgtgcgccgaggacaacatgcag
gtcgccaatgtcacgacgccggcgaactatttccacatcctgcgccgtcaggtgaagcgc
gacttccgcaagccgctgatcatgatgacgccgaagtccctgctgcgccacaagcgcgcc
gtctcctcgctgtcggaaatggcgggcgaaagctcgttccaccgcctgctctgggacgat
gccgaggtcatcaaggacggcccgatcaagctgcagaaggacgctaagatccgccgcgtc
gtgatgtgctcgggcaaggtctattacgaccttctggaagagcgcgaaaaacgcggcatc
gacgatgtctacctgctgcgtctcgaacagctctatccgttcccggccaaggcgctgatc
aacgaactgtcgcgcttccgcaatgccgagatggtctggtgccaggaagagcccaagaac
atgggtggctgggcgttcatcgacccctatctcgaatgggtgctcgcccatatcgacgcc
aagtaccagcgcgtgcgctacaccggccgtccggccgctgcctcgccggcgacgggcctg
atgtcgaagcacatggcgcagctcgccgccttcctcgaggacgcgctgggcggttga
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