Shinella sp. HZN7: shn_26985
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Entry
shn_26985 CDS
T04278
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
shz
Shinella sp. HZN7
Pathway
shz01501
beta-Lactam resistance
shz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
shz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
shn_26985
01503 Cationic antimicrobial peptide (CAMP) resistance
shn_26985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shz03036
]
shn_26985
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shz02000
]
shn_26985
01504 Antimicrobial resistance genes [BR:
shz01504
]
shn_26985
Chromosome and associated proteins [BR:
shz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
shn_26985
Transporters [BR:
shz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
shn_26985
Antimicrobial resistance genes [BR:
shz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
shn_26985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
Beta-barrel_RND_2
HH_EMRA
BSH_CusB
HH_YBHG
YknX_C
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
ANH07769
LinkDB
All DBs
Position
pShin-02:389957..391207
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AA seq
416 aa
AA seq
DB search
MIVRHLFLRLLTGATMAIVLSGCSEGEAVEARPILPKPEIGAQMLRPQTVTLTAELPGRT
SAHLVSEVRPRVGGIVRSMNFEEGSDVKAGDILYELDSAPFEAAYRNAEAALQRADGAIP
GAQSRLDRYRNLTARNAVSQQDLDNAQTALLQAQADVAAATAALETARINLEYTKIRAPI
DGRIDASSVTPGALVTADQAAPLATIRQLDLINVDVVQSSSSLLRLRREIAAGRIRTNGD
FVSVELLLEDGSRYPYPGKLKFSESSVSPTTGTLTIRAIFPNNDGLLMPGMYVRAIVEEG
FRENSFLLPQRAVSRNPRGEAVAKFVGADNRIEERVLVVERNLGNNWLVDEGVANGDRLV
IDGLQRAQNGQEVVVTAVRLDEQTGEVVAANESAQRLSDDTGITRLSSDASRIATR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgcgacacctgtttcttcgtctgctcactggggcaacgatggccattgtgctg
tcgggttgcagcgagggagaggccgtcgaagcgcgtcccatcctgccgaaaccggagatc
ggcgcacagatgctgcgcccccagaccgtgacgctcacggcggagttgcccggtcgcacg
agcgcccacctcgtctccgaggttcgtccgcgtgtcggcggcatcgtccgcagcatgaat
ttcgaggagggcagcgacgtcaaggcgggcgatatcctctacgaactggactctgcgccg
ttcgaggctgcttacaggaatgccgaggctgcccttcagcgcgccgatggcgccataccc
ggcgcgcagtctcggctcgatcgctacagaaacctgacggcacgcaacgccgtcagccag
caggatctcgacaatgcgcaaacggccctgctgcaggctcaggcggatgtggccgctgcg
acggcggctcttgagaccgcacgcatcaatctcgaatacacgaaaatccgcgcgcccatc
gacgggcgcatcgacgcgtccagcgttacgccgggtgcgctggtcaccgccgatcaggcg
gcgcccttggccacgatccggcaactggacctcatcaatgtcgacgtcgttcaatcgagc
tccagcctcttgcgtctgcgcagggagatcgcggcgggcaggatcaggacgaatggcgac
ttcgtcagcgtcgagctcctgctcgaggacggcagtcgttacccctatcccggcaagctg
aagttttcggaatcctccgtatcccccaccaccggcacgctcacgatccgggcgatcttt
ccaaacaacgacggactgttgatgccgggcatgtatgtccgcgccattgtcgaagaaggg
ttccgggaaaacagtttcctgttgccgcaacgtgccgtttcaaggaatcccaggggcgaa
gccgttgcgaagttcgtcggcgccgacaacaggatcgaagaacgggtgctggtcgtcgaa
cgcaacctgggaaacaactggctggtcgatgaaggggtcgcgaatggtgatcgcctggtg
attgacggattgcagcgcgcgcagaacggccaggaagtcgtggtgaccgcagttcggctc
gacgagcagaccggggaggtggttgctgccaacgagagtgcgcaacgtctatcggatgac
acgggcatcactcgtctctcgtcggacgcgtctcgcatcgccacccgctag
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