KEGG   Shinella sp. HZN7: shn_32140
Entry
shn_32140         CDS       T04278                                 
Name
(GenBank) hypothetical protein
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
shz  Shinella sp. HZN7
Pathway
shz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    shn_32140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shz02044]
    shn_32140
Enzymes [BR:shz01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     shn_32140
Secretion system [BR:shz02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   shn_32140
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ANH08785
UniProt: A0A1A9GCE6
LinkDB
Position
pShin-07:102955..105078
AA seq 707 aa
MNPAILLFGLVIAAAAAAFVASLAYAGLYYAFDNSPWMFQVLQDDMLASYRAARLDLAAG
DWHRPAIAAAAGLLAGGAMLVAAMTGKKKSTDARFLSPLEARALGLTRTGGVFVGRIGGS
LIKVPGGFTQRGSGRRRFLKPMLFGGKKLWIDGDDVGGFVIGPPRSGKGASLIVPNCLLW
PDSIVVLDMRGETYEATAGFRSKFSRVLRFSPADENGDTECYNPLDFVAIDPDQRDIDIN
SIATALLPTPKGDAYWISDARALFAGLTSWVLENPDIFDKDKNLGTVLNVVEGGDRPLRE
WLEEVANPELRATWISSFTYTTLARFAVMASKQFDGVYGSLAAAVRPFKNNRILRATARS
TFDIRAMRRENMSLYLDFRIQQIASIGPIFNVLMVQFMDYMSRNLMKRDERRVLVLLDEF
QNLGKLENALTVATVLGGYGVPCWFFVQSLRSIDNVYTREGRQILVNSARAQIFLGAQDP
EDQRYVSQLLGERKEVTVDKAVSTGVTLFDRKGATMSHKTTMRPLMRPDELGAMNETRCI
IKLRNQQPIFGLRNFYYADKDLLKRAWLQIRVPSSKAAIDGLANAGIERSEIMAVPSSAS
KINSIPGAKFAANSSVAIMMPSSLLQAEQAHETTHIADRMQGARQNSEASTSGDNPDFKS
ALKASVQRKAEAEQSIEKILKIFYNSPARKRAIKKVQKEITSALVDD
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgaacccggcgatcctgctgttcgggctggttatcgctgcggctgcggccgcattcgtc
gcgtccctcgcctatgccggcctctattatgccttcgacaattcgccctggatgttccag
gtgctgcaggacgatatgctggcgtcgtatcgcgcggcgcggctcgatctcgccgccggc
gactggcaccggccggcgatcgcggccgcggccggtctgctcgccggcggcgccatgctc
gtcgcggccatgaccggcaagaagaaatccacggatgcccgatttctcagcccgctggaa
gcccgcgccctcggtctcacgcgcaccggtggcgtgttcgtcggtcggatcggcggcagc
ctgatcaaggttccgggcggcttcacccagcgcggctccggccggcggcgatttctcaag
ccgatgctgtttggcggcaagaagctctggatcgacggcgatgacgtcggcggcttcgtt
atcggcccgccccggtcgggcaagggcgcctcgctgatcgtgccgaattgcctgctctgg
ccggacagcattgtcgtgctcgacatgcgtggcgagacctatgaggcgacggccggcttt
cgttcgaaattctcccgcgtcctgcgtttctcgccggccgacgaaaacggtgacaccgaa
tgctataacccgctcgattttgtcgcgatcgatcccgatcagcgcgacatcgacatcaac
tcgatcgcgacggcactgctgccgacgcccaagggcgatgcctactggatctccgacgct
cgcgccctgttcgccggcctcacctcctgggtattggagaaccccgatattttcgacaag
gacaaaaacctcggcacggtcctcaatgtcgtcgagggcggcgatcgaccgctgcgggaa
tggctggaggaggtcgccaaccctgagcttcgcgccacctggatcagctccttcacctac
accacccttgcccgcttcgccgtcatggccagcaagcagttcgatggcgtttatggctcc
ctcgccgcggccgttcggccattcaagaataatcgcatcctgcgcgcgacggcacggtcg
accttcgacatccgggcgatgcgccgcgagaatatgagcctctatctggacttccgtatc
cagcagatcgcctcgatcgggccgatcttcaacgtgctgatggtccagttcatggactac
atgtcgcgcaacctgatgaaacgggacgagcggcgcgtgctggtcctgctcgacgaattc
cagaacctgggcaagctcgaaaacgcactgaccgtcgccaccgtccttggcggttatggc
gttccctgctggttttttgtgcagtccctgcgatcgatcgacaacgtctatacacgcgaa
gggcggcagatcctcgtcaactctgcccgtgctcagatcttccttggcgcacaggatccc
gaggatcagcgatacgtgtcgcagttgctcggcgagcgcaaggaagtgacggtcgacaag
gcggtctcgaccggcgtgacgctgtttgaccgcaagggcgcgacgatgtcacacaagacc
acgatgcgccctctcatgcggccggatgagttgggcgcgatgaacgagacccgctgcatc
atcaagctgcgcaatcagcagccgatctttggcctccggaacttctattatgccgacaag
gaccttctgaagcgggcatggctgcaaattcgggtgccatcgagcaaagcggcgattgat
gggctagccaatgccggtattgagcgctcggaaatcatggcggtcccctccagcgcttcc
aagatcaactcgataccaggagcgaaatttgctgcgaattcctcagtcgccattatgatg
ccgtcgagcctgctgcaggccgagcaagctcatgaaacgacgcacatagccgatcgaatg
cagggcgcccggcagaatagcgaagcgtccacatcaggtgataatccagatttcaagtcg
gcgctgaaagcaagcgtccagcgaaaagccgaggccgaacaatcgatcgagaagatcttg
aaaatattctataactcccccgcgagaaagagagcgatcaagaaggtccaaaaggaaatc
acgtccgcgctggtcgacgactga

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