Ruegeria pomeroyi: SPO0343
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Entry
SPO0343 CDS
T00215
Symbol
sucB
Name
(GenBank) 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00020
Citrate cycle (TCA cycle)
sil00310
Lysine degradation
sil00380
Tryptophan metabolism
sil00785
Lipoic acid metabolism
sil01100
Metabolic pathways
sil01110
Biosynthesis of secondary metabolites
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
sil01210
2-Oxocarboxylic acid metabolism
Module
sil_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sil_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPO0343 (sucB)
09105 Amino acid metabolism
00310 Lysine degradation
SPO0343 (sucB)
00380 Tryptophan metabolism
SPO0343 (sucB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SPO0343 (sucB)
Enzymes [BR:
sil01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
SPO0343 (sucB)
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GFIT
Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
E3_binding
GCV_H
HlyD_D23
HrpJ
Motif
Other DBs
NCBI-ProteinID:
AAV93661
UniProt:
Q5LXC8
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All DBs
Position
complement(353635..355143)
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AA seq
502 aa
AA seq
DB search
MTIEVRVPTLGESVTEATVATWFKKPGDAVAVDEMLCELETDKVTVEVPAPAAGVMGDIV
AKEGETVGVNALLATITAGEGAAAAPAAPAAAAPAASSGGSVDVMVPTLGESVTEATVST
WFKKVGDSVAQDEMLCELETDKVSVEVPAPASGVLTEIVAAEGATVNASAKLAVISGSAS
GASPAPAAPAAAVTPAVATGKDIANAPSAEKAMAEAGITPAQVTGTGRDGRIMKEDVTAA
VAAAAAAPAPAAAAPAPAAAPRAPALAEDAAREERVRMTRLRQTIARRLKDAQNTAAILT
TYNEVDMTEVMALRNTYKDAFEKKHGVRMGFMSFFTKACCHALKEVPEVNAEIDGQDIVY
KNYVHMGVAAGTPQGLVVPVIRDADQMSFAEIEKAIAEKGKRARDGKLSMAEMQGGTFTI
SNGGVYGSLMSSPILNPPQSGILGMHKIQDRPMVINGEIKIRPMMYLALSYDHRIVDGKG
AVTFLVRVKEALEDPRRLLMDL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgaagttcgtgtccccacgcttggcgaatccgtgaccgaggccaccgtggcc
acctggttcaagaaacccggcgacgccgtggccgtcgacgagatgctctgtgagctggaa
accgacaaggtgaccgtcgaggtccccgcccctgccgccggtgtgatgggtgatattgtc
gccaaggaaggcgaaacggttggcgtcaacgcgctgctggccaccattaccgccggtgaa
ggggccgctgcggcccccgccgcacctgccgcagccgcacccgccgccagctcgggcggt
tcggtcgatgtcatggtgccgaccttgggtgaatcggtgaccgaggccaccgtctcgacc
tggttcaagaaggtcggcgacagtgtcgcgcaggacgagatgctgtgcgagctggagacc
gacaaggtctcggtcgaagtgcccgcacccgcgtcgggcgtattgaccgaaatcgtcgcc
gccgaaggcgccaccgtgaacgcatctgccaagctggcggtgatctcgggcagcgcctcg
ggcgccagccctgctccggccgcccccgccgccgcggtcacccccgcggtcgccacgggc
aaggacatcgccaacgcgccctcggcggaaaaggcgatggccgaggccgggatcaccccc
gcgcaggtcaccggaaccgggcgcgatggtcgcatcatgaaagaggatgtcactgccgcc
gtggccgccgcagcagccgcgccggcccctgccgctgccgctccggcccctgccgccgcc
ccccgcgcgcccgcccttgcggaggatgccgcgcgcgaagagcgcgtccgcatgacccgc
ctgcgccagaccatcgcccgccgcctgaaggatgcccagaacaccgccgcgatcctgacc
acctataacgaggtcgacatgaccgaggtgatggcgctgcgcaacacctacaaggacgcg
ttcgagaagaagcacggcgtgcgcatgggcttcatgtccttcttcaccaaggcctgctgc
cacgcgctgaaggaggtgcccgaggtcaacgccgagatcgacggccaggacatcgtctac
aagaactacgtgcatatgggcgtcgccgcgggtacgccgcagggcctggtggtgccggtg
atccgcgacgccgaccagatgtcctttgccgagatcgaaaaggcgatcgccgaaaagggc
aagcgcgcccgtgacggcaagctgtccatggcggaaatgcagggcggcaccttcacgatc
tcgaacggcggcgtctatggctcgctcatgtcctctccgatcctgaaccccccgcagtcg
ggcatcctcggcatgcacaagatccaggaccgcccgatggtcatcaacggcgagatcaag
atccgcccgatgatgtacctggcgctgtcctacgatcaccgcatcgtcgacggcaagggc
gcggtgaccttcctcgtgcgcgtgaaagaggcgctggaagatccccgccgcctgctgatg
gatctgtaa
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