Ruegeria pomeroyi: SPO1205
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Entry
SPO1205 CDS
T00215
Symbol
lpxC
Name
(GenBank) UDP-3-0-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00540
Lipopolysaccharide biosynthesis
sil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SPO1205 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sil01005
]
SPO1205 (lpxC)
Enzymes [BR:
sil01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SPO1205 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
sil01005
]
Lipid A
SPO1205 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AAV94501
UniProt:
Q5LU53
LinkDB
All DBs
Position
1258818..1259738
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AA seq
306 aa
AA seq
DB search
MQHTLKTSVTFQGIGLHGGKPVRMTLRPAAAGHGIWFKRTDIEIGDAMIPAIYDLVDRTP
LCTRLVNAAGVSVSTVEHIMAALAGCGVHNALIELDGPEVPIMDGSSVEFVRGIMARGVR
QQAAPVLAYEVLKAVTVEKDGARATLMPSDGLEIEFTIDFEDAAIGRQTRRMNMRNGSFA
RELSDSRTFCRRSDVEAMRANGLALGGTLENAVVVDGDEILTPGGLRHTDEAVRHKMLDA
LGDLYMAGGPILGCYVGDKAGHALTNALLRTLFETPGAVRPVLCTPEQAARLPGQGLIWS
EIPQVA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacatacgctgaaaacctcggtcaccttccagggcattggtctgcatggtggtaaa
cccgtccgcatgacccttcgccccgccgctgccggacacggcatctggttcaaacggacg
gatatcgagatcggcgatgcaatgatccccgcgatctatgatctggtcgaccgtaccccg
ctgtgcacccgtctggtgaacgccgccggggtatcggtgtcgacggtcgaacacatcatg
gcggccctcgccgggtgcggcgtgcataacgccctgatcgagctggacggccccgaagtt
ccgatcatggacggctcctcggtcgagttcgtgcgcggcatcatggcgcgcggcgtgcgt
cagcaggccgccccggtgctggcctacgaggtgctcaaggccgtcaccgtcgaaaaggac
ggcgcgcgcgccaccctgatgccctcggatgggctggagatcgaattcaccattgatttc
gaggatgccgccattgggcgccagacccgccgcatgaacatgcgcaacggcagctttgcc
cgcgaactgagcgacagtcgcaccttttgtcggcgcagcgatgtcgaggcgatgcgcgcc
aacgggctggccctgggcggcacgctggaaaacgccgtggtcgtcgatggcgacgagatt
ctgacgccgggcggtctgcgccatacggacgaggcggtgcgtcacaagatgctcgacgcg
ctgggtgatctctatatggccggtggcccgattctcggctgctatgtcggcgacaaggcc
ggtcatgccctgaccaacgccctgctgcgcaccctgtttgaaacgccgggtgcggtgcgc
cccgtgctgtgcacccccgaacaggccgcgcgcctgcccggacaggggctgatctggtcg
gaaatccctcaggttgcgtga
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