Ruegeria pomeroyi: SPO1397
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Entry
SPO1397 CDS
T00215
Name
(GenBank) hydrophobe/amphiphile efflux-1 family protein
KO
K18138
multidrug efflux pump
Organism
sil
Ruegeria pomeroyi
Pathway
sil01501
beta-Lactam resistance
sil01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SPO1397
01503 Cationic antimicrobial peptide (CAMP) resistance
SPO1397
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sil02000
]
SPO1397
01504 Antimicrobial resistance genes [BR:
sil01504
]
SPO1397
Transporters [BR:
sil02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SPO1397
Antimicrobial resistance genes [BR:
sil01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SPO1397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
AAV94684
UniProt:
Q5LTL7
LinkDB
All DBs
Position
complement(1464159..1467287)
Genome browser
AA seq
1042 aa
AA seq
DB search
MFSALFISRPKLAFVISLVLTILGGIGYLVLPVAQFPDITPPVVSVSANYTGANAETVEN
AVAAPIEAQVNGVDDMLYMTSTSADNGSYSLSVTFEVGTDPDIASVNVQNRVAQALSSLP
SEVTNSGVVTQKSSTNMLMVVTLTSPNDTYDSVFLSNYASINLKDALARVQGVGKADVLT
DLQYAMRMWMDPDKMAALSITPGDLIAAVREQNLEVSAGQIGAPPAPEGQTFQYTIKSKG
RLSTVEEFENIVIRTGAAGAVVRVRDIARVELGAQFYSASGYYQGKPATVLGIYQAPGAN
ALAVSERVTAELERLSRAFPEDVDYEIPFNTTDFVEQSLNDVVTTLMLTFVLVVSVVFVF
LGNWRATLVPAVAIPVSLIGTFAFLLAFGMSLNTISLFALVLAIGIVVDDAIVVVENVER
IIAEEGLSPPEATRKAMGQITGPVIATTLVLLAVFVPVTFMPGITGRLYSQFAVTISVAV
AISSINALTLSPALCGLVLRARSGPPKGVLALFERGIGGVRDGYVALVRKLLILPVISLA
IVAAIGAGAGGIFSNTSKGFLPLEDNGYLFVDVQLPDAATLGRTETVTQRLNDKLQQLDG
VANTVLVNGFSMLNGLSPNGAMIIVNLTNWDQRQDPELSADALLKRILNIAWGESAASIV
AFNPPPIQGLGMSAGIEMEVQQTGGGSAQDLAAAVGSLVYAANQRPEIGQSYTTFRANVP
QLFVDLDREKAKTLQVSVAEVFQTMQAHLGSYYINDFNLFGRVYRVMIQAEGSYRDKVED
IGNLYVRSQQGQMVPLGTLIDVENVLGPVLLKRHNLFRSATVTAVPAPGLSTGDAIQVMT
EESANALPPGYAFEWTGSAQQQLSSGGLVAVILGLAVLFAYLFLVGQYESWSMPVSILLS
VIVALFGAVAAVAVVGSDINLYTQIGMIMLVGMASKNGILIVEFAMEQRAKGLSIREAAA
EAAHQRFRAVMMTALSFLLGVVPLLTANGAGAASQKAIGVAVFGGMLAATVIGVVLVPVL
YAVMQGARERIKGSSDAPAPAE
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttctcggctcttttcatcagccggccaaagctggcctttgtcatctcgctggtcctg
accatcctgggcggcatcggttacctggtgctgccggtggcgcagttccccgatatcacg
ccgccggtggtcagcgtttcggccaactataccggcgccaatgccgagacggtggaaaac
gccgtcgccgccccgatcgaggcgcaggtgaacggcgtcgacgacatgctctacatgacg
tcgacctcggccgacaacggctcctattcgctgagcgtcaccttcgaggtgggcaccgat
cccgacattgcctcggtcaacgtgcagaaccgggtggcgcaggcgctgtcctcgttgccc
agcgaagtgaccaattccggcgtggtgacgcagaaatcctcgaccaacatgctgatggtg
gtcacgctcacctcgcccaatgacacctatgacagcgtgtttttgtccaactatgcctcg
atcaacctcaaggacgcgctggcccgggtacagggggtgggcaaggccgatgtgctgacc
gatctgcaatatgccatgcggatgtggatggaccccgacaagatggcggccctgtcgatc
acgccgggtgacctgattgccgccgtgcgcgagcagaaccttgaggtgtcggcgggccag
atcggcgcgccgcccgcacccgaggggcagacattccagtacacgatcaagtccaagggc
cggctgagcacggttgaagagttcgagaacatcgtgatccgcaccggcgccgccggcgcc
gtggtgcgggtgcgcgatatcgcccgggtcgagctgggggcgcaattctatagtgcctcg
ggctattaccagggcaagcctgccactgtgctgggcatctatcaggcgccgggcgccaat
gcgctggcggtgtccgagcgggtcaccgccgagctggagcggctgtcgcgcgcctttccc
gaggatgtggactacgagatccccttcaacaccaccgatttcgtggaacagtcgctcaat
gacgtggtgacgaccctgatgctgacctttgtgctggtggtctcggtggtgtttgtgttc
ctgggcaactggcgggccacgctcgttccggcggtggcgatcccggtctcactgatcggc
acattcgcgtttctgctggcctttggcatgtcgctgaacaccatctcgctgtttgcgctg
gtgctggccatcggcatcgtggtggatgatgccatcgtggtggtggaaaacgtcgaacgc
atcatcgccgaagaggggctgagcccgcccgaggcaacccgcaaggcgatgggccagatc
accgggccggtgatcgcgaccacgctggtgctgctggcggtgttcgtgccggtcaccttc
atgcccggcatcaccgggcggctctattcgcaattcgccgtcaccatctcggtcgcggtc
gcgatctcctcaatcaacgcgctgaccctgtcgccggcactatgtggcctggtgctgcgg
gcccgctcgggcccgcccaagggggtgctggccctgttcgaacgcggcatcggcggggtg
cgcgacggctatgtagcgctggtgcgcaagctgttgatcctgccggtgatctcgctggcc
atcgtggcggcgatcggcgccggggctggcggcatcttctccaacacctccaaggggttc
ctgccgcttgaggataacggatacctgtttgtagatgtgcaactgcccgatgccgccacg
ctgggccgcaccgaaaccgtgacccaacggctgaacgacaagctgcaacagcttgacggc
gtggccaatacggttctggtgaacgggttctcgatgctgaacgggctcagccccaacggt
gccatgatcatcgtcaacctcaccaactgggaccagcgacaggacccggagctgagcgcc
gatgcactgctcaaacgcatcctcaacatcgcctggggcgaaagcgcggcctcgatcgtg
gccttcaacccgccaccgatccagggcctgggcatgtcggcgggcatcgagatggaggtg
cagcagaccggtggcggttcggcccaggatctggccgcggcggtcggctcgctggtctat
gccgccaaccagcgccccgagatcgggcagagctataccaccttccgcgcaaacgtgccg
cagctgttcgtcgatctggaccgggaaaaggccaagacgctgcaagtgtcggtggccgag
gtgttccagaccatgcaggcgcatctggggtcctattacatcaacgacttcaacctgttt
ggccgcgtctaccgggtgatgatccaggccgagggcagctatcgcgacaaggtcgaggat
atcggcaacctctatgtgcgctcgcaacagggccagatggtgccgctgggcacgctgatc
gacgtcgagaacgtgctggggccggtgctgctgaaacggcataacctgttccgctcggcc
acggtgacggcggtgccggcgccgggcctgtccaccggcgacgcgatccaggtgatgacc
gaggaaagcgccaatgccctgccgcccggctatgcctttgaatggaccggcagcgcccag
caacagctgagctcgggcgggctggtcgcggtgatcctggggctggcggtgctgtttgcc
tatctgttcctggtgggccagtatgaaagctggtcgatgccggtttcgatcctgctttcg
gtgatcgtggcgctgttcggggcggtggcggcggtggccgtggtcggctcggatatcaac
ctctatacccagatcggcatgatcatgctggtgggcatggcctccaagaacggcatcctg
atcgtcgaattcgcaatggagcagcgcgccaaggggctgagcatccgcgaggctgccgcc
gaggccgcgcatcaacgctttcgcgcggtgatgatgactgcgctgtccttcctgctgggc
gtggtgccgctgttgaccgccaatggcgccggcgccgccagccagaaggcgatcggcgtg
gcggtgttcggcggcatgctggcggccacggtgatcggcgtggtgctggtgccggtgctt
tacgcggtgatgcagggcgcgcgcgagcggatcaagggcagttccgacgccccggccccc
gctgaatga
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