Ruegeria pomeroyi: SPO1565
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Entry
SPO1565 CDS
T00215
Name
(GenBank) citrate lyase, putative
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00630
Glyoxylate and dicarboxylate metabolism
sil00660
C5-Branched dibasic acid metabolism
sil00680
Methane metabolism
sil00720
Other carbon fixation pathways
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
Module
sil_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPO1565
00660 C5-Branched dibasic acid metabolism
SPO1565
09102 Energy metabolism
00720 Other carbon fixation pathways
SPO1565
00680 Methane metabolism
SPO1565
Enzymes [BR:
sil01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
SPO1565
4.1.3.25 (S)-citramalyl-CoA lyase
SPO1565
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
NuiA_2
Motif
Other DBs
NCBI-ProteinID:
AAV94852
UniProt:
Q5LT49
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Position
complement(1655644..1656621)
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AA seq
325 aa
AA seq
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MSFHPIEQAPARLNRSELAVPGSQPQMFEKAAQSDVDVIFLDLEDAVAPDEKEQARKNII
KALNDLDWGTKTMSVRINGLDTHYMYRDVVDVVEQAGERLDLIMIPKVGTAADVYAVDMM
VTQIEDAKGYKKRIGFEHIIETALGMQNVTEIAGASKRNESLHFGVADYAASTRARTTII
GGVNPDYSVLTDPLEDGSRAVHWGDMWHYALARMVVAARANGLRPIDGPFGDFQDPEGYR
AAAKRAAVLGCEGKWAIHPSQIALANEVMSPSEAEVTKARRILEAMAEAEAAGKGAVSLD
GRLIDYASIRQAEVLVEKARQIAGN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccaccccatcgaacaagcccccgcacggctcaaccgctcggaactggccgtg
cccggctcgcagccgcaaatgtttgaaaaagcggcacaatccgatgtcgacgtcatcttt
ctggatctcgaggacgcggtcgcgcccgacgagaaggaacaggcgcgcaagaacatcatc
aaggccctgaacgacctcgattggggcaccaagaccatgtcggtccgcatcaacgggctg
gacacgcattacatgtatcgcgacgtggtcgatgtggtcgaacaggccggcgaacggctg
gatctgatcatgattcccaaggtcggcacggcggccgatgtctatgcggtcgacatgatg
gtgacccagatcgaagacgccaagggctacaagaaacggatcggtttcgaacatatcatc
gagaccgcgctgggcatgcagaacgtgaccgagatcgccggcgcctcgaaacgcaacgaa
agcctgcatttcggcgtggccgattatgccgcttcgacgcgggcacgcaccacgatcatc
ggcggggtgaacccggattactcggtgctgaccgacccgctggaggatggcagccgcgcg
gtgcattggggcgacatgtggcattatgccctggcccgcatggtggtcgccgcccgcgcc
aacgggctgcgcccgatcgacgggccgtttggcgatttccaggaccccgagggctatcgc
gccgccgccaagcgggccgcggtgctgggctgcgaaggcaaatgggccatccaccccagc
cagatcgcgctggccaacgaggtgatgagcccgtctgaggccgaggtcaccaaggcgcgc
cgcattctggaggcgatggccgaggccgaggccgctggcaagggcgcggtctcgctcgat
gggcggctgatcgactatgcctcgatccgtcaggccgaggtgctggtggaaaaggcccgc
caaattgccggcaactga
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