Ruegeria pomeroyi: SPO3608
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Entry
SPO3608 CDS
T00215
Symbol
mclA
Name
(GenBank) malyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00630
Glyoxylate and dicarboxylate metabolism
sil00660
C5-Branched dibasic acid metabolism
sil00680
Methane metabolism
sil00720
Other carbon fixation pathways
sil01100
Metabolic pathways
sil01120
Microbial metabolism in diverse environments
sil01200
Carbon metabolism
Module
sil_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPO3608 (mclA)
00660 C5-Branched dibasic acid metabolism
SPO3608 (mclA)
09102 Energy metabolism
00720 Other carbon fixation pathways
SPO3608 (mclA)
00680 Methane metabolism
SPO3608 (mclA)
Enzymes [BR:
sil01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
SPO3608 (mclA)
4.1.3.25 (S)-citramalyl-CoA lyase
SPO3608 (mclA)
SSDB
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Paralog
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
AAV96832
UniProt:
Q5LMF5
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All DBs
Position
3814426..3815388
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AA seq
320 aa
AA seq
DB search
MSFRIQPAAPARPNRCQLFGPGSNTKLFVKMAASAADVINLDLEDSVAPSDKDSARANVI
EALNTIDWGNKYMSVRINGLDTPYWYRDVVDVLEQAGDRLDQIMIPKVGCAADVYAVDAL
VTAIERAKGRSKPISFEVIIESAAGIAHVEEIAASSPRLQAMSLGAADFAASMGMQTTGI
GGTQENYYMLREGTKHWSDPWHWAQAAIVAACRTHGVLPVDGPFGDFSDDEGYIAQAKRS
ATLGMVGKWAIHPKQIALANQVFTPSDDAVTEAREILAAMEAAKAKGEGATVYKGRLVDI
ASIKQAEVIVAQAELIAANG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccgcatccagcccgccgcgcccgcgcgccccaatcgttgccagctgttcggg
cccggctcgaacaccaagctgtttgtgaaaatggcggcctcggcggcggatgtcatcaac
ctcgatctcgaggattcggtggcgcccagcgacaaggacagcgcgcgcgcgaacgtgatc
gaggcgctgaacacgatcgattggggcaacaaatacatgtcggtgcggatcaacgggctg
gatacgccctattggtatcgcgacgtggtggatgtgctggaacaggcgggtgaccggctc
gaccagatcatgatccccaaggtcggctgtgcggcggatgtctatgcggtcgacgcgctg
gtcaccgcgatcgagcgcgccaagggccggagcaagccgatcagcttcgaggttatcatc
gaatccgccgcaggcatcgcccatgtcgaagagatcgcggccagcagcccccgcctgcag
gcgatgagcctgggcgccgccgatttcgctgcctcgatgggcatgcagaccaccggcatc
ggcggcacgcaagagaactattacatgctgcgcgaggggaccaaacactggtccgacccc
tggcattgggcccaggccgccatcgtcgccgcctgccgcacgcatggggtgctgccggtg
gacgggccgtttggcgatttcagcgatgacgagggctatatcgcgcaggccaagcgttcg
gcgacgctgggcatggtcggcaaatgggccatccatcccaagcagatcgcgctggccaac
caggtctttaccccctcggacgacgcggtgaccgaggcgcgcgagatcctcgccgcgatg
gaagcggccaaggccaagggcgagggcgccacggtctacaagggccgtctggtcgacatc
gcctcgatcaagcaggccgaggtcatcgtggcccaggcggaactgatcgccgcaaacggc
tga
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