Ruegeria pomeroyi: SPO3752
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Entry
SPO3752 CDS
T00215
Name
(GenBank) radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil00790
Folate biosynthesis
sil01100
Metabolic pathways
Module
sil_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
SPO3752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sil03016
]
SPO3752
Enzymes [BR:
sil01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
SPO3752
Transfer RNA biogenesis [BR:
sil03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SPO3752
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AAV96973
UniProt:
Q5LM11
LinkDB
All DBs
Position
3963540..3964259
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AA seq
239 aa
AA seq
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MTTLRIAEIFGPTIQGEGAVIGAPTVFVRAGGCDYRCSWCDSLHAVDSAYRDTWTAMTTE
QVWAEVARLSGGVPLTVSLSGGNPAIQDFGPLIEMGKAQGYRFALETQGSVARGWFRELS
PLILSPKPPSSGETVDWDRFADCIARARDAVTVIKIVVFDEADYLWAREVAARFPNLPIY
LQPGNHTPPPPDAEDAAIDMDGIMARYEWLIGRALSDRWFTPTILPQLHVLVWGNKRGV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccctgcgtatcgccgaaatcttcggtcccacgatacagggggagggcgcggtg
atcggcgcgcccaccgtgttcgtgcgggcgggcggttgcgattaccgttgttcctggtgc
gacagcctgcatgcggtggacagcgcctatcgcgacacctggaccgcgatgacaaccgag
caggtctgggccgaggtcgcgcgcctgtcgggcggggtgccgctgacggtttcactgtcg
ggcggcaacccggctattcaggacttcggcccgttgatcgagatgggcaaggcgcagggc
tatcgctttgcgctggaaacccaaggatcggtcgcgcggggctggtttcgcgaactgtcg
cctctgatcctcagccccaaaccgccttcgtccggcgaaacggtcgattgggaccggttc
gccgactgtatcgcacgggcgcgcgacgcggtgacggtgatcaagatcgtggtgtttgac
gaggccgattacctttgggcgcgcgaggtggcggcgcgtttcccgaacttgccgatctat
ctgcaaccgggcaaccacacgccgccgccgcctgatgccgaggatgcggccatcgacatg
gacggcatcatggcgcgttacgaatggctgatcggtcgggccctgtccgaccgatggttc
acccccacaatcctgccgcagctgcatgtgctggtctggggcaacaagcgtggcgtctga
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