Stenotrophomonas indicatrix: DAIF1_14070
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Entry
DAIF1_14070 CDS
T07128
Symbol
rlmL
Name
(GenBank) ribosomal RNA large subunit methyltransferase K/L
KO
K12297
23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:
2.1.1.264
2.1.1.173
]
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sinc03009
]
DAIF1_14070 (rlmL)
Enzymes [BR:
sinc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.173 23S rRNA (guanine2445-N2)-methyltransferase
DAIF1_14070 (rlmL)
2.1.1.264 23S rRNA (guanine2069-N7)-methyltransferase
DAIF1_14070 (rlmL)
Ribosome biogenesis [BR:
sinc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DAIF1_14070 (rlmL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0020
Methyltrans_SAM
THUMP
RlmL_1st
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_31
PrmA
Methyltransf_11
Methyltransf_15
N6_Mtase
DUF4136
Motif
Other DBs
NCBI-ProteinID:
QBR43858
LinkDB
All DBs
Position
1567982..1570165
Genome browser
AA seq
727 aa
AA seq
DB search
MARPPAVPDHLRTDPVKFFVSCAKGLEYLLADELSALGLEKATATIAGVNADGELEQALR
IVMWSRLASRVLWPIDEFECPDEQALYDGVRALPWHEHIKPEMTLAVDAHVSGDKITHAR
FAAQRIKDAIVDRMRDEGLERPSVNTDLPDVRVNLSLRKGRASLSIDLGGGPLHRRGWRG
AAHDAPLKENLAAALLMRAQWPRLHAAGGGLLDPMCGSGTLLIEGALMAADVAPGLMRHG
SLPPSRWLGFDKAAWKTIQSEARDREAAGLAALKPVIHGSDIDPVAIQAARENAEVAGVA
HAIRFTRADVADLPTPEQEIGAVVCNPPYDERLAADPALYRKLGNALQKAVPQWRASLLC
GNDELAFATGLRAGKKYQMFNGALECALIVCDPIAVPGRDPAQVRELSEGAQMVANRLRK
NLKKFKSWRAREGITCFRAYDADLPEYAAAIDVYEEDGGQRRTFLHVQEYAAPAAIPEND
VRRRRNELLAAAREVFGVPPEQVSMKSRERGKGGSKYGRFEQREEFLVVRENNALLQVNL
FDYLDTGLFLDHRPLRRLMAEQARGKRFLNLFCYTGVASVQAAVAGAASTTSVDLSATYL
QWCYDNLALNGQGGNQHLLVQADAMAWLEGDRGQYDVIFCDPPTFSNSARAEDFDVQREQ
VKMLRAAVARLAPGGVLYFSNNFRRFKLEENAIAEFAQCREISASTIGPDFERNARIHRA
WELKRLA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcccggccccctgccgtgcctgaccacctgcgaaccgatcccgtgaaattttttgtc
tcctgcgccaagggcctggaatacctgcttgccgatgagctgtcggccttgggcctggaa
aaggccaccgccaccatcgccggcgtcaacgccgatggcgaactggagcaggcgctgcgg
atcgtgatgtggtcgcggctggccagccgcgtgctgtggccgatcgacgaattcgaatgc
ccggacgagcaggcgctgtacgacggcgtgcgtgcgctgccgtggcacgaacacatcaag
ccggagatgaccctggcggtggacgcgcatgtgtccggcgacaagatcacccatgcccgt
ttcgccgcgcagcggatcaaggacgccatcgtcgaccgcatgcgtgacgaaggcctggag
cgcccttcggtcaacaccgacctgccggacgtgcgcgtcaacctgtcgctgcgcaagggc
cgcgcctcgctgtcgatcgacctcggcggcggcccgctgcatcgccgcggctggcgcggt
gcggcgcatgacgcgccgttgaaggaaaacctggctgccgcgctgctgatgcgcgcgcag
tggccgcgcctgcacgctgccggtggcggcctgctggacccgatgtgcggcagcggcacc
ctgctgatcgaaggcgcgctgatggcggccgatgtcgcccccggcctgatgcgccatggc
agcctgccgccgagccgctggctgggcttcgacaaggccgcctggaaaaccatccagagc
gaagcgcgtgatcgcgaagcggccggccttgccgcgctgaagccggtcatccacggcagc
gacatcgacccggtggcgatacaggccgcgcgcgagaacgccgaagttgccggcgtcgcc
catgccatccgcttcacccgcgccgatgtggctgacctgcccaccccggagcaggagatc
ggcgcggtggtctgcaacccgccgtatgacgagcgcctggccgccgatccggcgctgtac
cgcaagctgggcaatgccctgcagaaggccgtgccgcagtggcgcgccagcctgctgtgc
ggcaatgacgaactggccttcgccaccggcctgcgtgcgggcaagaaataccagatgttc
aatggtgcgctggaatgcgcactgatcgtctgcgatccgatcgcggtgccgggccgcgac
ccggcacaggtgcgcgagctgagcgaaggcgcgcagatggtggccaaccgcctgcgcaag
aacctgaagaagttcaagagctggcgcgcgcgcgaaggcatcacctgtttccgtgcctac
gatgccgatctgccggaatacgcagcggccatcgacgtgtacgaggaagatggcggccag
cgccgcacgttcctgcatgtgcaggaatacgctgcaccggccgcgattcccgagaacgac
gtgcgccgccgccgcaatgaactgctggccgctgcgcgcgaggtgttcggcgtgccgccg
gaacaggtatcgatgaaatcgcgtgaacgtggcaagggcggcagcaagtacggccgtttc
gagcagcgcgaggagttcctcgtggtgcgcgagaacaacgcgctgctgcaggtgaacctg
ttcgattacctggataccggcctgttcctcgaccatcgcccgctgcgccggctgatggcc
gagcaggcgcgcggcaaacgcttcctcaacctgttctgctacaccggcgtggccagcgtg
caggcggcggtggccggtgcggccagtaccaccagcgtcgacctgtcggccacctacctg
cagtggtgctacgacaacctggccttgaatgggcagggcggcaatcagcacctgctggtg
caggccgatgcgatggcctggctggaaggcgatcgcggccagtacgacgtgatcttctgc
gacccgccgacgttctccaactcggcccgcgccgaggacttcgacgtacagcgcgagcag
gtgaagatgctgcgtgcggcggtcgcgcgactggcgccgggtggcgtgctgtacttctcc
aacaacttccgccgcttcaagctggaagagaacgccatcgccgaattcgcccagtgccgc
gagatcagcgccagcaccatcggcccggatttcgagcgcaatgcgcgcatccatcgtgcg
tgggagctgaagcgcctggcgtga
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