Stenotrophomonas indicatrix: DAIF1_16580
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Entry
DAIF1_16580 CDS
T07128
Symbol
arpC
Name
(GenBank) antibiotic efflux pump outer membrane protein ArpC
KO
K18300
outer membrane protein, multidrug efflux system
Organism
sinc
Stenotrophomonas indicatrix
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sinc02000
]
DAIF1_16580 (arpC)
01504 Antimicrobial resistance genes [BR:
sinc01504
]
DAIF1_16580 (arpC)
Transporters [BR:
sinc02000
]
Other transporters
Pores ion channels [TC:
1
]
DAIF1_16580 (arpC)
Antimicrobial resistance genes [BR:
sinc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
DAIF1_16580 (arpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QBR44095
LinkDB
All DBs
Position
1819476..1820897
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AA seq
473 aa
AA seq
DB search
MVIRTLAMAVSSLVLAGCVSVGPNYKAPVQEPVVLQGAQQPVFSTTSPVASWWAQFDDPV
LEELVHGALSDNLDLRVAVARVSQARAVFVESRFDQAPHVTAGGSYDRRKQPDPQLGGQR
VFSESYQLGFDAGWELDLFGRKRRAAEAARADLDAEQANLADAQVLIAAEVARNYFELRG
TQKRIAVAQRTLVNLRDTQRLTEARWELGAGSELDVQSSRARLKAIEADIPLLEVAETQS
RNRLAVLLGQRPEVLTAMLAPHEVPAFAKALPLGDTRELLRQRADVRVAERRLAAATARV
GVATADLFPRLSLSGFVGFLGGDASGLVNGNNKAWSLTPSLSWAAFDFGTVKARLRASKA
EAEGVAAQYEQAVLLALEDTENALTRYSKQQARLAIVVEQAQAARRAESLAQIRYREGSE
DFLTLLDAQRTQLVADDALAAAESEVNVSVVGVYKALGGWGQSPQAPSVAQAR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtgatccgcaccctggcgatggccgtctccagcctggtgctggcgggctgtgtcagc
gtcggccccaactacaaggcaccggtgcaggagcccgtcgtcctgcagggtgcacagcag
ccggtcttcagcaccacttcgccggtggccagctggtgggcgcagttcgatgacccggtg
cttgaagaactggtgcacggcgcgctgtcggacaacctggacctgcgcgtggctgtcgcc
cgtgtcagccaggcccgtgccgtgtttgtcgagagccgcttcgaccaggcgccacacgtt
accgctggcggcagctacgaccgccgcaagcaacccgatccgcagctgggtgggcagcgg
gtgttcagtgaaagctaccagctcggcttcgatgcgggctgggagctggatctgttcggc
cgcaagcgccgtgctgcagaggctgcgcgtgccgacctggacgccgagcaggccaacctt
gccgacgcgcaggtgctgatcgctgccgaagtggcacgcaactacttcgaactgcgtggc
acccagaagcgcatcgcggtggcccagcgcaccctggtcaacctgcgcgatacgcagcgg
ctgaccgaggcgcgctgggaactgggtgccggcagcgaattggacgtgcagagcagccgc
gcacggttgaaggccatcgaggccgacatcccgctgctggaagtggccgagacgcagtcg
cgcaaccggttggctgtcctgcttggccagcgcccggaagtgctgaccgccatgctggcg
ccgcacgaagtgccggcgtttgccaaggcactgccgctgggtgatacccgcgaactgctg
cgccagcgtgccgacgtgcgcgtggccgagcgtcgcctggctgccgccaccgcgcgtgtc
ggcgtggccacggccgatctgttcccgcggctgtcgctgtccggtttcgtcggcttcctc
ggcggcgatgccagtggcctggtcaacggcaacaacaaggcctggtcgctgaccccgtcg
ttgagctgggcggcattcgacttcggcacggtcaaggcacgcctgcgtgccagcaaggcc
gaggccgagggcgtggccgcgcagtacgaacaggcggtgctgctggcgctggaggacacc
gaaaacgcgttgacccgctactccaagcagcaggcacggttggccatcgtggtcgagcag
gcgcaggcggcgcggcgtgccgaatcgctggcgcagatccgctaccgcgaagggtcggag
gacttcctgaccctgctggacgcgcagcgcacgcagctggtggccgatgatgcactggcg
gccgccgaatcagaggtcaatgtcagtgtcgtgggtgtgtacaaggcacttggtggctgg
ggccagtcaccgcaggcgccgagcgtggcgcaggcgcgctga
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