Stenotrophomonas indicatrix: DAIF1_27060
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Entry
DAIF1_27060 CDS
T07128
Symbol
gdh
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
sinc
Stenotrophomonas indicatrix
Pathway
sinc00220
Arginine biosynthesis
sinc00250
Alanine, aspartate and glutamate metabolism
sinc00430
Taurine and hypotaurine metabolism
sinc00910
Nitrogen metabolism
sinc01100
Metabolic pathways
sinc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sinc00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
DAIF1_27060 (gdh)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DAIF1_27060 (gdh)
00220 Arginine biosynthesis
DAIF1_27060 (gdh)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
DAIF1_27060 (gdh)
Enzymes [BR:
sinc01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
DAIF1_27060 (gdh)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_HM1
GDH_ACT3
GDH_HM2
ELFV_dehydrog
HisKA_3
Motif
Other DBs
NCBI-ProteinID:
QBR45132
LinkDB
All DBs
Position
complement(2958459..2963435)
Genome browser
AA seq
1658 aa
AA seq
DB search
MKPQKTAAKTVKNKSKPVESEVAVTAGFSLEPVYTALRKRYPAAAQAEAVAFAADFYKRM
EADEFPHHSAEEWAALAAETLEFARARKAGKANVRVFNPTAKSNGWESPHTVLQIINDDM
PFLVDTVTMSLAEHGVGVHVLGHPVLHFTRDKAGKLTKVGEGQLESVMLLEIDRQPAEAM
ADIEQAINKALDEVRAIVRDWQPMQDKALALADDLGSRQLPVDAASRKEAQEFLRWAADN
HFTFFGYREYRVEKQGKEDVLAPLNDTGLGLMRGKDKSAARPVKTLAAQGLNTTSGLKDA
LILTKTNARSRVHRAGYMDYIGVLEFDAKGKIIGEQRFLGLFTSSAYNRRPWEIPLVRQR
YEHVMKQSGLAGSSHSGKALRHILETLPREELFQSSEDELFRTAMGVLGLQERVRSRLFL
RRDKYSRFISALVYLPRERFNTDVRLRIEAMLKEALHGEYVDSSVVLGESPLAQVHLIVR
PKPGEMLDVDTAELEQKLAQVLRNWQDDLREALVTRHGEAEGLRIAARIGKALPAGYIED
NSTAVAANDVSQLDALTRPDDLRLSLQAVPRESGDGLRLKLYRQLDDIPLSDALPMMENM
GLRVIAERPYRLSVDNAPVYVQDFEVESTAGAIDAASVDEAFGETFARVWHGDAENDGFN
RLVLAAGLHWRQVAMLRGYCKYLLQTGVPFSQAYVEGTFTRYPLLARLLVELFEARFDPA
TGHESKEDIAAGQAQLKAHLEVLAAGDEATLKVLKTVVDARKGDRDAQMQAAREALLKLM
DRVSSLDEDRILRSFMGVIDATLRTSYYQTDANGQHGHVISFKFDSALVPDLPKPRPYRE
IFVYGPRVEGTHLRFGAVARGGLRWSDRREDFRTEVLGLVKAQMVKNTVIVPVGAKGGFF
AKMPPVNGDRDAIFANGVACYKLFIQGLLDITDNIVNNKIVPPVDVVRHDMDDPYLVVAA
DKGTATFSDIANGLAIAHGFWMGDAFASGGSVGYDHKGMGITARGAWESVKRHFRALGRD
SQTQDFTAVGVGDMSGDVFGNGMLLSRHIRLVAAFDHRHIFLDPNPDAATTFVERERLFT
VPRSSWADYDAKLISKGGGVYPRSLKSIEITPQVREALGLDENVKALSPNDLMSAILKAP
VDLLWNGGIGTYVKAASEQHSDVGDRANNALRVNGGELRCKVVGEGGNLGMTQLGRIEAA
QAGVLLNTDFIDNSAGVDTSDHEVNIKILLNDVVRAKKLTVEQRNKLLASMTDEVAALVL
NDNYRQNQALSLMERMAVKRLGSKQHFIRTLEQQGLLDRQIEFLPSDAELSQRKARGQGL
TRPELSVLLSYSKLVAFAQLLDSDIPEDPYLSKELQRYFPTPLQKKYADAMERHRLKREI
IATAVTNQTINRMGATFLMRMQEDTGRSIAEVAKAYTISRETLDARALWAQIDALDGTLP
ESVQIDALEVIWKLQRSFVRWLLSRPGPMPGITEAVNRYQGPFNDIRVASGVLPDSQRPT
YEALVAEWKEKGLPSALAQQLAELHFLEPAFDIIELARTRKLKPVDVSKIHFRLGDALQL
PWLFEQIDALEVNGRWHAVARGVLRDELAAHHRSLAGQVLATKGSTAEAKVAAWIGRDDS
SLRFTLAMLAELAEQKTLDYPTVSVAVQRLGQLAAHGA
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcaaaaaaccgcagccaagaccgtgaaaaacaaaagcaaaccagttgagtcg
gaggtcgcagtgaccgctggtttctccctggagccggtgtacacggccttgcgcaagcgt
taccccgcggccgcccaggccgaggcagtggcattcgcagccgatttctacaagcgcatg
gaggccgacgagttcccccatcacagcgctgaggagtgggccgcgctcgcagccgaaacg
ctggaattcgcccgtgcccgcaaggccggcaaggccaacgtccgcgtgttcaatccgacg
gcgaagtccaacggttgggaatcgccgcacaccgtgctgcagatcatcaacgacgacatg
ccgttcctggtcgacaccgtgaccatgtcgctggccgagcatggcgtgggcgtgcatgtg
ctgggccacccggtgctgcatttcacccgtgacaaggccggcaagctgaccaaggtcggc
gagggccagctggaatcggtgatgctgctggagatcgaccgccagccggccgaagccatg
gcagacatcgagcaggccatcaacaaggcgctggatgaagtgcgcgccatcgtgcgcgac
tggcagccgatgcaggacaaggcgctggcgctggccgacgaccttggcagccgccagctg
ccggtcgacgctgcctcgcgcaaggaagcacaggaattcctgcgctgggccgccgacaac
cacttcaccttcttcggctaccgcgagtaccgcgtcgagaagcagggcaaggaagacgtg
ctggcgccgctgaacgacaccggcctgggcctgatgcgcggcaaggacaagtccgctgca
cgtccggtcaagaccctggccgcgcagggcctgaacaccacgtccgggctgaaggacgcg
ctgatcctgaccaagaccaatgcccgttcgcgcgtgcatcgtgccggttacatggattac
atcggcgtgctggaattcgacgccaagggcaagatcatcggcgaacagcgcttcctcggc
ctgttcacctccagcgcctacaaccgccgcccgtgggaaatcccgctggtgcgccagcgc
tacgaacacgtgatgaagcagtccggcctggccggctccagccatagcggcaaggccctg
cgccacatcctggaaaccctgccgcgcgaagaactgttccagtccagcgaggacgaactg
ttccgcaccgcgatgggcgtgctgggtctgcaggagcgcgtgcgcagccgcctgttcctg
cgccgcgacaagtacagccgtttcatttccgcgctggtctacctgccgcgcgagcgtttc
aacaccgacgtgcgcctgcgcatcgaagcgatgctcaaggaagcgctgcacggcgagtac
gtggacagctcggtggtgctgggtgaatcgccgctggcccaggtgcacctgatcgtgcgt
ccgaagccgggcgaaatgctcgatgtcgacaccgccgaactggaacagaagctggcccag
gtgctgcgcaactggcaggacgacctgcgcgaagcgctggtcacccgccatggcgaagcc
gaaggcctgcgcatcgctgcgcgtatcggcaaggcgctgccggccggttacatcgaagac
aacagcaccgccgttgccgccaacgatgtcagccagctcgatgcgctgacccgtccggac
gacctgcgcctgagcctgcaggccgtgccgcgcgaatccggcgatggcctgcgcctgaag
ctgtatcgccagctggatgacatccccctgtcggacgcgctgccgatgatggaaaacatg
ggcctgcgcgtgatcgccgagcgtccgtaccgcctgtcggtggacaacgcgccggtgtac
gtgcaggacttcgaggtcgagtcgaccgctggtgcgatcgatgcggccagcgtcgatgaa
gccttcggtgagacctttgcccgcgtctggcacggcgatgccgagaacgatggcttcaac
cgcctggtgctggctgccggcctgcactggcgccaggtcgccatgctgcgtggctactgc
aagtacctgctgcagaccggcgtgccgttctcgcaggcttacgtcgaaggaaccttcacc
cgctacccgttgttggcacgcctgctggtggaactgttcgaagcccgcttcgatccggcc
accggccatgaaagcaaggaagacatcgccgccggccaggcgcagctgaaggcccacctc
gaggtgctggctgccggcgacgaggcaaccctgaaggtgctcaagaccgtggtcgacgcc
cgcaagggtgaccgcgatgcgcagatgcaggccgcgcgcgaagcgctgctgaagctgatg
gaccgcgtgtcgagcctggacgaggaccgtatcctgcgttccttcatgggcgtgatcgat
gcgaccctgcgcaccagctactaccagaccgatgccaatggccagcacggccatgtcatc
agcttcaagttcgattcggccctggtgccggacctgcccaagccgcgcccgtaccgcgaa
atcttcgtgtatggcccgcgcgtggaaggtacccacctgcgcttcggtgccgtcgcccgt
ggcggcctgcgctggtcggatcgccgcgaagacttccgtaccgaagtgctgggcctggtc
aaggcgcagatggtcaagaacaccgtcatcgtgccggtcggcgcgaagggcggcttcttc
gccaagatgccgccggtgaacggcgatcgcgatgcgatcttcgccaacggcgtggcctgc
tacaagctgttcatccagggcctgctggacatcaccgacaacatcgtcaacaacaagatc
gtgccgccggtggatgtcgtgcgccatgacatggacgatccgtacctggtggtggccgcc
gacaagggcaccgcgaccttctccgacatcgccaacggcctggccatcgcgcacggcttc
tggatgggcgatgcgttcgcctccggcggttcggttggttacgaccacaagggcatgggc
atcaccgcgcgcggcgcatgggagtcggtcaagcgccacttccgtgcactgggccgtgac
agccagacccaggacttcaccgcggttggcgtcggcgacatgtccggcgacgtgttcggc
aacggcatgctgctgtcgcgccacatccgcctggtcgctgcgttcgaccaccgccacatc
ttcctggacccgaacccggatgcagcgaccacgttcgtcgaacgtgagcgtctgttcacc
gtgccgcgttcgagctgggcggactacgatgcaaagctgatcagcaagggcggcggcgtg
tatccgcgcagcctgaagtcgatcgagatcaccccgcaggtgcgtgaagcgctgggcctg
gacgagaacgtcaaggcgctgtcgccgaacgatctgatgagcgcgatcctgaaggcaccg
gtcgacctgctgtggaacggcggcatcggtacctacgtcaaggccgccagcgagcagcac
agcgatgtcggcgaccgcgccaacaacgccctgcgcgtgaatggtggcgagctgcgctgc
aaggtggtgggcgagggcggcaacctgggcatgacccagctgggccgcatcgaagctgcc
caggccggcgtgctgctcaacaccgacttcatcgacaactcggccggtgtggatacctcc
gaccacgaagtcaacatcaagatcctgctcaacgatgtggtgcgggccaagaagctgacc
gtcgagcagcgcaacaagctgctggcgtcgatgaccgacgaagtcgccgcgctggtgctc
aacgacaactaccgccagaaccaggcgctgagcctgatggagcggatggcggtcaagcgc
ctgggttccaagcagcacttcatccgtaccctggaacagcagggcctgctggatcgccag
atcgagttcctgccgtccgacgccgagctgtcccagcgcaaggcacgcggccagggcctg
acccgtccggaactgtcggtgctgctgtcctactccaagctggtggcgttcgcgcagctg
ctggattcggacatcccggaagatccgtacctgtccaaggaactgcagcgctacttcccg
acgccgctgcagaagaagtacgccgacgcgatggagcgtcaccgcctgaagcgcgaaatc
atcgccacggccgtgaccaaccagaccatcaatcgcatgggtgccaccttcctgatgcgc
atgcaggaagacaccggccgctccattgccgaggtcgccaaggcctacaccatcagccgc
gaaacgctggacgcacgcgcgctgtgggcgcagatcgatgccctcgacggcacactgccg
gagtcggtgcagatcgacgcgctggaagtgatctggaagctgcagcgttcgttcgtacgc
tggctgctgtcgcgcccgggcccgatgccgggcatcaccgaggcggtcaaccgctaccag
ggtccgttcaacgacatccgtgttgcttcgggtgtgctgccggattcgcagcgtccgacc
tacgaagccctggtggccgagtggaaggaaaagggcctgccgtcggcgctggcacagcag
ctggccgaactgcacttcctggaaccggcgttcgacatcatcgaactggcccgtacccgc
aagctgaagccggtggatgtctccaagatccacttccgcttgggcgacgccctgcagctg
ccgtggctgttcgagcagatcgacgcgctggaggtcaacggccgctggcacgcggtggca
cgtggcgtgctgcgcgacgaactggccgcacaccaccgcagcctggccggccaggtgctg
gccaccaagggcagcaccgctgaagccaaggtggccgcgtggatcggtcgagacgacagc
agcctgcgcttcaccctggcgatgctggccgaactggccgagcagaagaccctggactac
ccgaccgtttcggtcgcggtgcagcgcctgggtcagctcgctgcccacggcgcgtaa
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