Sesamum indicum (sesame): 105155189
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Entry
105155189 CDS
T04135
Name
(RefSeq) uncharacterized protein LOC105155189
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sind03036
]
105155189
03400 DNA repair and recombination proteins [BR:
sind03400
]
105155189
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
105155189
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105155189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
Bac_rhamnosid_C
DUF4200
Motif
Other DBs
NCBI-GeneID:
105155189
NCBI-ProteinID:
XP_011069355
UniProt:
A0A6I9SHU3
LinkDB
All DBs
Position
Unknown
AA seq
1640 aa
AA seq
DB search
MYSKTPQSLMNKRPREDSSMERPRKSPYGVVKVEDDAGETKIFKFRVLLPNGTTVELKLS
ELRSEMPIEEFVGVVKREYFNVAKQRRSLEPKRAINWKYQDLYFTDVHANKMRIKVNFQD
FIPNTWHFLWLHDGSAEPDAYEEMWDLTPDTDLLKELPDDYTFETALADLIDNSLQALWS
NGKFERRLISVELQADRISIFDTGPGMDGTDGNLVKWGKMGASLHRSARGKAIGGKPPYL
MPFFGMFGYGGPVATMCLGRRCIVSSKTKNRNKVFTLHLEREALVSSSCSESCWKTKGGI
RDPLEDEKENSPHGSFTKVEIFEPKIKIVGIKHLRRKLKDIYFPYIQCDEMSGKTSMPIK
FQVNGEDLVGIQGGEVATTYLHSCNGPNFILQLHFSNSQDTSSLGQCPKVLLEANARLKC
VYFPIIKGKESIQKIIDELEADGCGIRESYESFSRVSVRRLGRLLPDTRWPLLPFMEPKQ
KVGEKAQILKRCCSRVKCLIDTDSGFNPTPNKMDLAHHHPYTKALKNFGNRVPDNEKDVQ
IEIFRDGKKLTLAQLEKQYGDWISEMHDRYDEEIDGGLDQATLVVVSSNFKKLGISSDVV
RVHEKIEWKGTCWAAGQKIKVLKGACPGCHKNNVFATLEYIILQGLPGDACGEARLICRP
LGVPKAKGCRLLVEKGTIDIRDSLSLPIRVLDSGKCLLVDDTEWESKLQTYYYQKLPSAI
DLLSDIDCHELKVDGGLPVDVVQAGDAPPENIVAVIRPKAFNPENSSKRLDQKFIVRDSL
DMSLEVNFRDSGENVGSHVHVYSVRIAPSSCKGLHGFYIFPLKSKCPALFHKAGSYALSF
SLNGYRDVRFEKVVQVQAAANVGSWKVISHKLDAVYTVRVGSCFEPLSIGCYDRYNNSIL
FTSVPKLIVKLVSNRAVLAQVRTPKVDVTADKLTVKLKGIVVKSSKLDDIRPTYEAALSI
STPDEAFSVAFPCRVIPGNPYTIIAHPRKLKMQLIPGHIVEELALEVFDEYGNHAKEDEK
ILLSLDGFSFQDESNILHDGGVMYYVKKVAANGFVELSNSLKVSKGYGKDVLLSATFRDR
VIFTLNFQTEKREIRTASKVFKNCEAGSQLENIVFEVVNPEGEVDESIHDEEKHGQSHTL
TIKSNSFDIDDSVRYSFRHGRCTIRSIPLPHKEGIFSFSAVHFRYPELNLDIEVHVEKTW
QGNFAEMGNYEDEGNPIFSPQNSCQENLLSLPHSPAPKVPEVVNRSLSPQSSSRYVVNRS
LSPQSSSRYVLPIGYLPSPKTPKLESRNENSDISPILELEDDLTNCGMRKMGRERNIEIL
NTRRSHIEQHISVLQASIDGDLRNATRTCAKELIQKQIESKSQSASAVICRLHEEVPFES
RPRDILGIVALLGTVESIEISRILAQYLGEDQMRAIVCKNYAAAHCLETNTLHELATKFG
KSISGGYLALCLEDVRPITSGPSTNPQELLPLQKPTLPNGDVPQGFIGYAVNMISTEASY
LRWRTKSGHGLRETLFYRLFGELQVYRNRDCMMSAQSCIKNGAVSLDGGIMRGNGLVSLG
HWEPDILFPVQDKALTPQSLKSLQMLERKKRELTELNRQIDEESKALEQDRIKLEMSRDR
YNSYMSQNGSSSAARRSLHY
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgtactcaaagacaccccagagcttgatgaacaagaggcctcgtgaagattctagcatg
gagaggccgagaaagagtccatatggagttgttaaggtagaagatgatgctggtgagaca
aagattttcaagttccgcgtacttttaccgaatggcacgacggttgagctcaaattgagc
gagctgcgcagtgaaatgccaatcgaggagtttgttggtgttgtgaagagggaatatttt
aatgtcgcgaagcaaagaaggtctctagaaccaaagagagcaatcaattggaagtaccaa
gacctatattttactgacgttcatgcaaataagatgagaatcaaagttaattttcaggat
tttataccaaacacgtggcacttcctctggcttcatgatgggtcagccgagcctgatgca
tatgaggaaatgtgggatcttactccggacacagacttgttgaaggagcttcctgacgac
tacacatttgaaactgcccttgctgacctaatagacaactccctgcaagctctctggtct
aatggcaaatttgagcgaagattaataagtgtggaattgcaagcagacagaatttcaatt
tttgacacaggacctggaatggatggcacagatgggaacctggtgaagtggggaaaaatg
ggagcatcattgcacagatcagcaagagggaaagccatagggggcaaacccccatatcta
atgcctttctttggcatgtttggatatggaggtcctgttgctaccatgtgtttgggaaga
cgttgcattgtttcatcaaaaacaaagaatcgtaacaaagtatttacactacacctggaa
agagaagcattagtgagctcgtcatgctcagaaagctgctggaagacaaaaggggggatc
agagatccgttagaagatgaaaaagagaattcacctcatggtagcttcacgaaagttgag
atctttgagcctaaaatcaagattgtgggcataaaacatctacggcgcaagttaaaggac
atttactttccctatatccagtgcgatgaaatgtctggaaaaacaagcatgcctattaaa
tttcaggtcaatggagaagatttagtgggaatacagggaggggaagtggccacaacatac
ttgcattcgtgcaacggtccaaactttattctgcaacttcactttagcaacagtcaggat
acttcttcgcttggtcaatgtccaaaagtgcttctagaagcaaatgcaagactgaagtgt
gtttactttcccattatcaagggcaaagagagcattcagaaaattatagatgagttagaa
gcagatggttgtggaatcagagagagctatgagagttttagtcgtgtatctgtaagaagg
ttgggtcgtctcctgccagacacacgctggcctttgcttccatttatggagccaaaacag
aaagtaggtgagaaggcacagattttgaaaaggtgctgctctagagtcaagtgcttaata
gacactgattctggtttcaatccaacacctaataagatggacttggcccatcatcaccca
tacaccaaggcattaaagaattttggcaacagggttcctgacaatgaaaaagatgtgcaa
attgaaatatttagagacggaaagaaattgactctcgcgcaattggaaaagcagtatggt
gattggatttccgaaatgcatgatcgatatgatgaggagattgatggaggcctggatcaa
gccactcttgttgtcgtttcttcaaactttaaaaagcttggcatatcttcagatgttgtg
agggttcatgaaaagatcgagtggaaaggaacatgctgggctgctggtcagaaaatcaaa
gttctaaagggagcttgtcctggatgtcataaaaacaatgtatttgctacactggaatac
ataatccttcaagggcttcctggagatgcttgtggtgaggcccgactaatttgcaggcca
cttggtgtaccaaaagcaaaaggttgccgactcttggttgaaaaaggaaccattgacatt
cgtgactctctatcgttaccaatcagagtgcttgacagtggaaagtgcttgctcgttgat
gataccgagtgggagagcaagcttcagacatactactatcagaaattgccttctgccatt
gatctattaagcgacatagattgtcatgagttgaaagttgatggggggttgcctgttgat
gtagtacaagctggagatgctcctccggagaatattgttgctgtcattcgtccaaaggct
ttcaatcctgaaaacagttccaagagattggaccaaaaattcatagttagagatagtctt
gacatgagcctagaagttaatttcagagatagtggtgaaaatgttggaagtcatgttcat
gtttattctgtgagaatagcaccttcttcctgtaaggggcttcatggcttctacatattt
cctctgaaatcaaaatgtcctgccttattccacaaagctggatcctatgcattatcattc
tccctgaatggttatagagatgtaaggtttgaaaaagtagtgcaagttcaggctgcagct
aatgttggcagttggaaagtcataagtcataagctggatgcagtatatactgtcagggta
ggttcttgttttgaacctctttctatagggtgctatgatagatacaacaacagtatcctg
tttacaagcgttccaaaactgatcgtcaagcttgtctcaaatagagcagttcttgcacaa
gtacgcactccgaaagtggatgtaacagctgacaagttaactgtgaaacttaagggtatt
gttgttaaaagtagtaaattggatgatattcgtccaacttatgaagcagccttaagcata
agcacgccagatgaagcattctctgttgctttcccatgtcgagttatacctggaaatcca
tatacgataattgcacatccacggaaactaaaaatgcagttgattccaggccatattgtt
gaagagcttgctttagaggtttttgatgaatatggtaaccatgctaaagaagatgaaaaa
atcttgttgagtttagatggtttttcattccaagatgaaagcaatattcttcatgatggc
ggggttatgtattatgtaaagaaggtggctgctaatgggtttgttgaactgagcaactct
ctaaaagtttctaagggatatggcaaagatgttctcctctctgcaacattccgagataga
gtcattttcacgcttaactttcaaactgaaaaacgagagatccggactgcgtcaaaggtt
ttcaagaactgtgaagcaggttctcaactagagaatattgtgtttgaggttgttaatcct
gaaggtgaagttgatgaaagcatccatgacgaagagaaacacgggcagtctcatactctc
acgattaagtcaaattcatttgatatcgatgactctgtgagatacagcttccgacatgga
cgttgtacaattcgttctattcctctcccacacaaagaagggattttctccttctcagct
gtgcattttcgctatccagaactaaacttagatattgaggttcatgttgagaagacctgg
caagggaattttgccgagatgggaaattatgaggatgaaggcaatcctatattttcaccc
caaaattcatgtcaagaaaacttactaagtctcccacactcacctgccccgaaggttcca
gaagtagtgaatagaagtctttctccacaaagttcgagcagatatgtagtgaatagaagt
ctttctccacaaagttcgagcagatatgtgttgccgattggttacttgccttctccaaag
actccaaaattggagagcagaaatgaaaattcagatatatccccgattctggagctggaa
gatgatctaacaaattgtggtatgagaaagatgggtcgtgaaaggaacatagagatccta
aatactcgccggtcacacattgagcagcatatatcagttttacaagcttccatagacggt
gatcttcgtaatgcaacgagaacgtgtgcaaaagagttgatacagaaacaaatagaaagc
aaaagccaatcggcatccgcagttatctgcagattgcatgaagaagtaccatttgaatca
aggccgcgagacatacttggtattgtagcgcttcttggaacagttgaaagcattgagatt
agcaggattttggcacaataccttggtgaggatcaaatgcgtgcaattgtgtgcaaaaac
tacgcagcagcacattgtttagagaccaatacccttcacgagctagcaactaaatttgga
aaatctataagtggaggatatcttgcattgtgcctcgaggatgttaggccaatcaccagt
gggccaagcactaatccccaagagctactgcccttgcaaaagcctaccttgccgaatggc
gatgtgccacaaggtttcatagggtatgcagttaacatgattagcacagaagcaagttat
ctacggtggagaacaaagagcggtcatggccttcgagagactttattttatcgtcttttt
ggcgagcttcaagtttacagaaacagagattgcatgatgtcggcacagtcatgcattaaa
aatggagccgtgtcattggatggaggcatcatgagaggaaatggactagtctctcttggc
cattgggaaccagatatcttatttccagtccaagacaaggctcttactccacagagctta
aaaagtttgcaaatgttggaaagaaaaaagagagagcttacagagttaaaccggcagatc
gatgaggaaagcaaggctcttgaacaagacagaataaagcttgagatgtcgcgagatagg
tacaacagctacatgtctcagaatggatcctcatcggcagcaagaagatcattgcactat
tga
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integrated database retrieval system
