Sesamum indicum (sesame): 105161929
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Entry
105161929 CDS
T04135
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03420
Nucleotide excision repair
sind04120
Ubiquitin mediated proteolysis
sind04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105161929
04120 Ubiquitin mediated proteolysis
105161929
09124 Replication and repair
03420 Nucleotide excision repair
105161929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105161929
03400 DNA repair and recombination proteins [BR:
sind03400
]
105161929
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
105161929
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
105161929
Multi subunit type E3
SCF complex
Ring finger protein
105161929
Cul2 complex
105161929
Cul3 complex
105161929
Cul4 complex
105161929
Cul7 complex
105161929
Cul8 complex
105161929
Cul9 complex
105161929
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105161929
TCR (transcription coupled repair) factors
Cul4-CSA complex
105161929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
105161929
NCBI-ProteinID:
XP_011078093
UniProt:
A0A6I9T7E5
LinkDB
All DBs
Position
LG5:3871764..3875349
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AA seq
121 aa
AA seq
DB search
MASLDTDVNMVPAGEGSSGAGPSNPTTSAKKAKRFEIKKWNAVALWAWDIVVDNCAICRN
HIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYG
H
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctcgacaccgacgtgaatatggttcccgccggggagggctcttccggggcc
ggaccttccaatccgacgacgtccgccaagaaagcgaagcgatttgagatcaagaagtgg
aacgccgtcgctctctgggcttgggatattgtggtggacaattgtgctatttgcaggaat
catattatggatctctgtattgagtgtcaggctaatcaagccagtgccacgagcgaagaa
tgcacggttgcgtggggtgtttgcaaccatgccttccacttccactgcattagcagatgg
ctcaagacccgtcaagtctgccctctggataacagcgagtgggagtttcagaagtatggt
cactag
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