Sesamum indicum (sesame): 105163431
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Entry
105163431 CDS
T04135
Name
(RefSeq) ABC transporter I family member 19 isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105163431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105163431
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105163431
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
NACHT
ORC-CDC6-like
AAA
AAA_23
AAA_28
SMC_N
AAA_15
AAA_18
AAA_22
AAA_5
DUF963
AAA_33
Zeta_toxin
AAA_25
SRP54
AAA_30
AAA_16
AAA_24
PduV-EutP
DUF3584
AAA_14
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
105163431
NCBI-ProteinID:
XP_011080072
UniProt:
A0A6I9T792
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Position
LG6:2576999..2579808
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AA seq
286 aa
AA seq
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MGEESHSIQVSGMQFSYDANSPLFFDFSLNIYPGSRCLLVGANGSGKTTLLRILAGKHMV
GGRDVVRVLNCSAFHDTSLVCSGDLAYLGESWSKTVGSAGELPLQGDFSAEHMIFGVEGV
DPVRRDKLIELLDIDLHWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVARMD
LLEFFKEECEQRRATIVYATHIFDGLETWATDLVYVQEGVLKRSDKLADLKELKNNMNLL
SVVESWLRTETKIEKKKPVNSPSPLQKSSPFDNSPFRSSRHMAYYR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagaatcacatagtatacaagttagcggcatgcagttctcctacgacgctaat
tcccctttgttcttcgatttcagtctcaacatctacccaggatcgcggtgcctcctcgtg
ggcgccaatggatctgggaagacgactttgctgaggatattggcggggaagcatatggtg
ggagggagagatgtggtgagagtgttgaactgttcggcttttcacgacacgagtctcgtt
tgcagtggtgatttggcatatttgggagaatcttggagtaaaactgtgggctctgctggc
gagctgccgctccaaggagacttctctgcagaacatatgatttttggagttgaaggggtt
gaccctgttaggcgagataagctgattgagttgttggatattgatcttcattggagaatg
cacaaagtttctgatggtcaacgtcgtcgagtccagatctgcatgggtctccttcatcct
tacaaggtacttttgcttgatgaggtcactgtcgacctggatgtcgtggctaggatggat
ttgctggaatttttcaaggaagagtgtgaacagagaagagcaacaattgtttatgcaact
cacatttttgatgggctggagacctgggcaaccgatcttgtttatgttcaagagggtgta
ctgaagaggtcagataaactagctgatctgaaagaactgaagaataacatgaatttgctc
tctgtcgttgagtcgtggctccggactgaaactaagattgaaaagaaaaaaccagtcaac
tctccatccccactccagaaatcctctccgtttgataattctccttttaggtcttcaaga
catatggcatactaccgttga
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