Sesamum indicum (sesame): 105169008
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Entry
105169008 CDS
T04135
Name
(RefSeq) transcription factor PIF3 isoform X1
KO
K12126
phytochrome-interacting factor 3
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04075
Plant hormone signal transduction
sind04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105169008
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105169008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sind03000
]
105169008
Transcription factors [BR:
sind03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105169008
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
105169008
NCBI-ProteinID:
XP_011087566
UniProt:
A0A6I9TPI6
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Position
LG8:16577979..16583896
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AA seq
743 aa
AA seq
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MPLSEFLRLARGKLESGRQKPCPSDPSSRAEGDVVELVWENGQIMMQGQSSRVTQSPVRN
SFSSNTHRVRDAGVVNSTSARIEKFGGVESILDDMLPVVPSGDLDLSQDDEMVPWLSYPM
VDALPQDYSSDLLPGISGVTTNGLSTQNSFVSVEKRSSCNQTVSNSHNGGNTLKASSPKT
RPFFSWPPQPSQTSVALGSGVSDIISNSMSNHPDDIYRNPAQGRDVVNNSTSMKMQRQNI
GPATNNSNLLNFSNFTRPAGLVKANPPNSGGIPASVSSGVERMGVKEKGSAIGSSNPLKS
SSLERFNSTQKDIDFHGSSAMLAIVNSRKPAVKAPKESYTPDRTENLCRETSIKNDKPQI
VSDSANSTKAVPDGERTVEPMVASSSVGSGYSADRVSCEKAHNSKRKFGDVEESECRSDD
IETESVGVKKSTPARGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKADKAS
MLDEAIEYLKTLQLQVQIMSMGAGLCMPPMMFPTGMQHVHPAHVPHFSPMGVGIGMGMGF
GMGMLDMNGGSPGCPVFPVPPMQVPHFPSPMSGPGNFQRIPGPNLPIYGQPGQGLANSVP
RAPVVPLTGKPPGPSATGSGAFRSGSHNEVSSAAPTLNSGDPVIDKNAQLMCNAEASTPV
NHKSNQLQATNEVVDQSAAVQENKQATDATCPAALTSTTATDTSKEPGSSTILDHVEEII
PNSQNGLSAYEVEHCLSYETPVL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttcagagtttttgagattggctagaggaaagcttgaatcgggccggcagaaa
ccatgtccatctgatccctcttcccgggctgagggcgatgtggttgagcttgtatgggag
aatggccagattatgatgcaaggtcagtccagtagggttactcaaagccctgttcgtaac
agtttttcttctaacacacatagagttcgtgatgccggagtagtaaattccaccagtgca
agaatcgaaaaatttggtggagttgagtctatcttggatgatatgttgccagtagtgccc
tcaggggacttggatttgagccaagatgatgaaatggttccttggttaagttatcccatg
gttgatgctctgcctcaagattacagttctgatcttttaccgggaatatctggtgttacg
accaatggattgtccacccaaaatagctttgtatcggtggagaagagaagtagttgtaat
caaactgttagtaattcgcataatggtgggaatactttgaaggcttcttcaccaaaaact
cgtcctttcttttcatggccgcctcagccttcccagacatcagttgccctaggatctgga
gtttctgacattattagcaatagtatgagtaaccatccggatgatatatacaggaaccct
gctcaaggtagagatgtagtaaataattcaacaagtatgaagatgcagaggcagaatata
ggaccagctactaataattcaaatttgctgaacttctccaattttacaagaccagcaggc
cttgttaaagccaatcccccaaactccggtggaattccagcttcagtttcatcaggggtg
gaaaggatgggagttaaggagaaaggttcagctattggcagcagtaatccactcaaatcc
tcgtctcttgagcgatttaatagtacacaaaaagacattgacttccatggttcatctgct
atgcttgctatagtcaattctagaaaaccagcagttaaggcaccaaaggagtcgtatacc
cctgacagaactgagaatttatgccgagaaacttccatcaagaatgataagccccaaatt
gtaagtgattctgcgaattcaacaaaagcagtcccagatggtgagagaacagttgagcct
atggttgcgtcttcttctgtaggctctggctatagtgctgatagagtttcttgcgaaaaa
gcacataattcgaagagaaaatttggtgatgttgaggaatcagaatgccgtagtgatgat
attgaaacagaatctgttggtgtcaaaaaatcaactccagctcgaggtactggatcaaag
agaagccgagcagcagaagtacataatctttccgaaaggagacgaagggataggattaac
gagaaaatgcgtgcattacaagaacttatacccaattgcaacaaggcggataaagcttca
atgcttgatgaagccattgaatatctaaagacccttcaacttcaagtacagattatgtcc
atgggggctgggttatgtatgccacctatgatgtttcctacaggaatgcaacacgtgcat
cctgctcatgttccccatttttcaccaatgggtgtcggaataggaatgggtatgggattt
gggatgggtatgctagacatgaatggtggatctcctggatgccctgtttttccggtaccc
cccatgcaagtaccacacttcccttctccaatgtcaggccctggaaatttccagagaatt
cccggtccaaaccttcccatttacgggcagcccggtcaaggactggccaattcagtacca
agagcacctgtggttcctttaactgggaagcctcctggaccttcagccacgggttcaggt
gctttcaggagtggaagtcacaatgaagtgtctagtgcagctccaactttgaattctggg
gacccggtgatagacaagaatgcacagttaatgtgcaatgcagaagctagcactccagtc
aaccacaaatctaatcagctgcaagctacaaacgaagttgtagatcagtctgctgccgtg
caagagaataaacaggctacagatgctacgtgtcctgcggctctgacctccacaacagca
actgacactagcaaagaaccaggaagttccactattctcgatcacgtggaagagataata
cccaattcacaaaacggcttatctgcatacgaggtagaacattgccttagttatgagact
ccagttttgtag
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