Sesamum indicum (sesame): 105174617
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Entry
105174617 CDS
T04135
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105174617
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
105174617
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
INTS4_C
Cnd1
PDS5
HEAT_MROH2B_C
HEAT_GCN1_C
Adaptin_N
TPR_DNAAF5
RskA_C
Motif
Other DBs
NCBI-GeneID:
105174617
NCBI-ProteinID:
XP_011095076
UniProt:
A0A6I9UB67
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Position
LG11:15006713..15015488
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AA seq
931 aa
AA seq
DB search
MEHRLLSVTHSTLREDNNLSPKSAAAVLSLITNPFTSDSTLSSLLEALVLRLHNPNSNSD
HQKVLSLLSALSHHHPRLGHRIAAAAHAFILLPSTPTPSLPHALSLLDPAHPFQTDPFSD
ESLFLSLCFWQCVKTRRWILRNLSKFRVRPSVLITVLLGFTKDPYPYIREAALDGLVMLS
NGIVVEDPSLVEGCYFRAVELLFDAEKSVRLSAVRAVSEWGHLLLALKGDKTQREWSDAL
FVQLCLMIRDTDAEIRVAAFNALGKIRTVSEDILLQTLSKKTLAATKEKKYPGQYTAKLF
NIPATAAAFTFVHGLEDEFYQVRRSACHALQMLTVLSAEFSGGAVHVLMDILNDDSMVVR
FQALETLHHMAMHDHLKVEESHLHMFFGTLLDNNGLIRSAARKALQFTKLQKLAMFRSCV
NGLIKNLELYPQDEAEIFNVLYKIGRTHGKFVTSIIHEVSQELEPSFDGKLSFDKKRTAA
LLVLAISAPVSLERSICSIPPRIYSYAVTLLGRLSSGLVHVMDQNTLLAYLSHCSKFTVA
STSENFEGELLNFDLKNSFTHLWKKSDAFSFPESMELKKVTTPVHGYLLNSHIKATSCVE
IVLWKVVELWPLIKLRCMNDVVQTLRSWKEELRNFSCNSRHPAGVLGFALRYLHVIKLLG
KAWACYFSQRNLQFTEMGVLEALLHKMESRLKEMLCRHAGLSRGEKLHILELMLVAYTLR
LSCGVTSYFEDYINKLKNVLCLVEYLQKEGLVELSHFVNELQNISCEIGHSEDGFIYKLD
RLQKSLNLFSLKHIVLSGELKYLDAEVDVCDNEFQNPLPFIPGLPVGIPFDITLYNISSE
TRLWITTTLGEKSAQFVFLDLSEFGGSNEMRRFTFLSPFFRTPLAKRFSLKVSIAMECLS
EDQHFKHCNGPKHELIHLCKGKEVHLSMPVK
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccgcctcctctcggtcacccacagcacactcagagaagacaacaatctctcc
cccaaatccgcagccgccgtcctctctctcatcaccaacccatttacttcagactcaact
ctctcttctctgttagaagctctagttctccgcctccacaaccccaattctaattctgac
caccagaaagtgctctccctcctctccgctctctcccatcaccacccccgcctgggccac
cgtattgccgccgcagcacacgcattcatcctccttccctccacccccactccctcccta
ccccacgccctctctcttctcgacccggcacatcctttccagaccgacccgttttccgac
gagtctctctttctctcgctctgcttctggcagtgcgtgaaaacaaggagatggatactg
agaaatctgagtaaatttcgcgtgaggccgtcggtgttgattacggtcctcctggggttt
accaaggacccatatccgtatataagagaagctgcattggatggtttggttatgttgagt
aatggtattgtggtggaggatccaagtctggttgaaggttgctattttcgtgctgtggag
cttctgtttgacgcggagaagtctgtgcgactttcggctgttcgcgcggtcagtgagtgg
ggacatttgcttctggcattgaagggagataaaactcaaagagaatggtcagatgcatta
tttgtacagctctgtttgatgataagagacacggatgcggagataagggttgcagccttt
aatgcacttggaaagattcgaactgtttctgaggatatcctgctacaaacgttgtctaag
aagactttggcagcaaccaaagaaaaaaaatacccaggccagtacactgccaaactattt
aacataccagcaactgctgctgcatttacttttgttcatggattggaggatgaattttat
caggtcagaagatctgcttgtcatgctctgcaaatgctaacggtcctttccgctgaattt
tctggtggtgctgtacacgtgttgatggatatactcaatgatgactcgatggtcgtacga
tttcaagctttggagactctgcatcatatggccatgcatgaccatctcaaagtggaagaa
tctcacttgcacatgttctttggcactttacttgataacaatggcttgataaggtctgct
gcgaggaaggctctccagttcactaagttgcagaagttggcaatgtttagatcatgcgtc
aatggtcttataaagaacttggaactgtatccacaggatgaagctgaaatatttaatgtt
ttatacaaaattggtcgaacgcatggaaaatttgtgaccagcatcatacatgaggtttct
caagagttagagccttcttttgatggcaagttgagttttgacaaaaagaggacagctgca
ttgttagtgctggccatctcagctccagtgtcacttgaaagaagtatctgcagcattcct
ccacggatttattcttatgcagttacactgttgggtagactatccagtggtcttgttcat
gtgatggaccagaatacccttttagcttatttgtctcactgcagcaaattcactgttgcc
tctacttctgaaaattttgaaggggaattactgaattttgatttgaagaatagctttact
cacttgtggaaaaaaagtgatgctttcagttttcctgagtcaatggagctgaagaaagtt
accaccccagttcatggttacttgctcaattcacatattaaagcaacaagctgcgttgaa
attgtcctctggaaagttgtggagttgtggccattgataaaacttcgatgcatgaacgat
gtagttcaaacactgaggagctggaaagaagagctgagaaatttttcttgcaactcacgg
catcctgctggcgttttgggttttgctttgagatacttacatgtcataaaattgcttgga
aaggcttgggcctgttatttttctcagagaaatctccagttcactgagatgggagttttg
gaggccctgttgcataaaatggaaagcagactgaaagagatgctatgtaggcatgcaggt
ctgagcagaggggaaaaattgcatatcctagagctaatgcttgtggcttatacattgaga
ttgtcctgcggagtgacttcctatttcgaggattacataaacaagcttaaaaatgtcctt
tgtcttgtggaatatcttcagaaagaaggattagttgaactttctcattttgtaaatgag
cttcagaatatatcctgtgaaattggccactccgaagatgggttcatttacaagttggac
aggcttcagaagtctcttaaccttttctccctgaagcatattgtgttatccggagaactc
aagtaccttgatgctgaagtggatgtctgtgacaatgagttccaaaatcctcttcctttt
attccaggactacctgtcggcataccatttgacatcacattgtataacatttctagcgaa
accagattgtggattacaactactcttggtgaaaaatcagctcagtttgttttcctagat
ttgagtgaatttggaggtagcaacgaaatgaggagatttacatttctctctcctttcttt
aggacacctttagcaaaacgcttctcgttgaaagtttctattgctatggaatgcttgtct
gaggaccaacacttcaagcattgtaatgggccaaaacatgagcttattcacctttgcaaa
ggaaaagaagttcatctatccatgcctgttaaataa
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