Sesamum indicum (sesame): 105178493
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Entry
105178493 CDS
T04135
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105178493
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
105178493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
DEAD
zf-RING_5
Prok-RING_4
ResIII
zf-RING_2
zf-RING_UBOX
zf-RING_6
FAD_binding_2
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
105178493
NCBI-ProteinID:
XP_011100278
UniProt:
A0A6I9UM10
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Position
LG16:745585..758397
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AA seq
909 aa
AA seq
DB search
MKLRSHAAGPSSSKGKKKLKYRESSDEDGHGATSSDSDYYLHSVEGEDLSDGLEDDRREE
AWDLNFALEAAVEIGNDDLLHNVPRRRKRNSLKNEGGWSHKVQDKQEEYINGEIENEMYG
NSEEFNFTDVSEKYERKKKTRKKRRDKSVLMWEVLEQENERWVAENLELDMDLINQNEMV
AETVDPSDDLIIPLLRYQKEWLAWSLKQEESAVRGGILADEMGMGKTLQAIALVLLKRSI
SRGIGHQLPPSSASFTNELPAIKGTLIICPLVAVMQWVSEIDRFTSKGSTKVLVYHGANR
AKNLYQFSEYDFVITTYSIVEAEYRKYVMPPKEKCQYCGKLFYDRKLKIHLKYICGPGAV
KTAKQSKQQRKEQKPKKISDIEVSTSTGRNDGKKHGSGNKEMENDHSIENSAVVGRLSSE
GKSILHSVTWERIILDEAHYIKDRRSNTTRAVLALQSSYKWALSGTPLQNRVGELYSLVR
FLQIVPYSYYFCKDCDCRILDYSTSAECPGCPHRNVRHFCWWNKYISSPIQDFGNTGSGR
DAMLLLKHKILKTIVLRRTKKGRAADLALPPRIALLRRDALDVVEEDYYTALYNESQAQF
NTYIEAGTVLNNYAHIFDLLTRLRQAVDHPYLVEYSLTSMERKGKTVDTSNDEKCSLCND
HEEDTVVTSCGHVFCKPCLIDFGATMGQNSCPSCSKPLTVDFTATKDGKRQNSKTTIKGF
RPSSILNRIQLDDFQTSTKIDALREEIRFMVERDGSAKGIVFSQFSSFLDLIHYALQKSG
VNCVQLDGSMSMGARDTAIKRFTEDPNCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPA
VERQAQDRIHRIGQYKPIRIIRFIIENTIEERILKLQEKKELVFEGTVGGSSEALAKLTE
ADLRFLFVT
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgctctcatgccgcgggcccttcttcttccaaagggaaaaagaagctcaag
tacagagagagctctgatgaggatggtcatggggcgacgtcctcggattctgattattat
ttgcacagtgttgaaggtgaagatttgtcggatggtcttgaagatgatagaagggaagag
gcttgggacttaaattttgcgttagaggctgcagttgaaattggcaatgatgatcttttg
cataatgtccccaggagaaggaaaaggaactccttgaagaacgagggaggatggagtcac
aaggttcaggacaagcaagaagaatacattaatggagaaattgagaacgaaatgtatggt
aactcagaggaatttaattttactgatgtctcggagaagtatgagagaaaaaagaagact
aggaagaagagacgggataaaagtgtactgatgtgggaagtattggaacaagaaaatgag
agatgggttgcagagaatttggaattagatatggatttgataaatcagaatgaaatggtg
gcagaaactgttgacccttcagatgacttgataataccgctgctgagataccagaaagag
tggttagcttggtctttgaaacaagaggaatctgctgtcaggggaggcatccttgcagat
gagatggggatgggcaagactctccaggcaatagcacttgttcttcttaaaagaagtatc
tcgagaggaattgggcatcagttgcccccatcttcagccagtttcacaaatgagttacca
gcaattaagggcacacttattatatgccccttggtagcagtgatgcagtgggtaagtgag
atcgaccggttcacttcaaaaggaagcaccaaggtgctggtttatcatggtgccaacaga
gcaaaaaatctttatcagttttctgagtatgactttgttataacgacgtattcgattgtt
gaggccgaatacagaaaatacgtaatgccccctaaagaaaaatgccagtactgtggaaaa
ttattctacgatcgtaagttgaaaattcacttgaagtacatatgtggacctggtgctgtt
aagaccgctaagcagtcaaagcagcagagaaaagaacaaaagccaaagaaaatatccgac
attgaggtaagcacgagtacaggtcgaaatgatggaaagaagcatggcagtggcaacaag
gaaatggaaaatgaccattccattgagaattcagctgtggttgggcgactctcatctgaa
ggaaaatctattttgcattctgttacatgggagcgtatcatattggatgaggctcattat
ataaaagatagacgcagcaataccactagagctgttcttgctttgcaatcttcatataaa
tgggctttaagtggcactccccttcagaatcgagtgggggagctctattcacttgttcgc
tttctgcagatagttccttactcttattatttctgcaaggactgtgactgccgtattctt
gattacagcacctcagctgaatgtccaggctgtcctcatagaaatgttcggcacttctgc
tggtggaataaatatatttcctcaccaatacaagattttggaaatactgggtctggtaga
gacgccatgcttttgttaaagcacaaaattctgaaaaccatagtgttgagacgtaccaaa
aagggcagggcagctgatcttgcacttcctcctagaattgcacttttgagacgggatgct
ctggatgttgttgaagaagattattatacagcattgtacaacgagagtcaggcacagttt
aatacatatattgaggcgggaacagtgttgaataactacgcccacatatttgatcttctg
acgcgcctccgacaggcagttgatcatccttaccttgtcgaatattctcttacttcgatg
gaaagaaagggtaaaacagttgatactagcaatgatgaaaaatgtagtttatgtaatgac
catgaagaagatactgtggtcacgtcatgcggccatgttttctgcaaaccttgtttgata
gattttggtgctaccatgggacagaattcctgcccttcttgttcaaagccactcacagtt
gatttcactgccaccaaggatggcaaacggcagaattcaaaaacaactattaaaggattc
agaccgtcaagtatcttgaatagaattcagcttgatgacttccagacaagtacaaaaata
gatgctttgagagaagaaattagatttatggttgaaagggatggctctgccaagggtatt
gtcttcagccaattctcgtcttttctggatctcatacattacgctcttcagaagtctggg
gtgaactgtgttcagttagatgggtccatgtccatgggagcaagagatactgctattaaa
agatttactgaggatcctaattgcagaatttttctaatgagcttgaaagctgggggtgtt
gccctcaatctcactgtagcatcacatgttttcttgatggatccttggtggaatcctgct
gtggagcggcaggctcaggatagaatacatcgaataggccaatataaaccaatcaggatt
attaggtttattattgaaaatacaatagaggagaggattttgaagttgcaggagaagaag
gaactagtgtttgaagggactgtgggtggatcttcagaggccctcgccaaactgacagaa
gctgatctcagattcctgtttgtgacctaa
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