Singulisphaera sp. Ch08: V5E97_30685
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Entry
V5E97_30685 CDS
T11449
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sing Singulisphaera sp. Ch08
Pathway
sing03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sing00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V5E97_30685 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sing03400
]
V5E97_30685 (nth)
Enzymes [BR:
sing01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V5E97_30685 (nth)
DNA repair and recombination proteins [BR:
sing03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V5E97_30685 (nth)
Prokaryotic type
V5E97_30685 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
XBH02657
UniProt:
A0AAU7CCH6
LinkDB
All DBs
Position
complement(8204112..8204798)
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AA seq
228 aa
AA seq
DB search
MPRLPQPIDDPVLQAKQVVRALVRLYPTVECALVHRNPYELLVATILSAQCTDARVNMVT
PALFARFPDPRALAKADLSEVEELIHSTGFFRAKAKNLVAMANLVVALHAGEIPSDLDAL
TALPGVGRKTAHVVLGNAFAIASGVVVDTHVKRLSFRLGLTTNLDPIQVERDLAKIIPRK
EWVDFSHRLIEHGRRTCVAIRPRCGECAIASICPKLGVTLPTSKRLPK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggcttccccagcccattgatgaccccgttctccaggccaagcaagtggttcgc
gccctggttcggctctacccgacggtcgaatgcgccctggtccatcgcaatccgtacgag
ttgctcgtcgccaccatcctctctgcgcaatgcaccgatgcgcgagtcaacatggtcact
cccgcgctgttcgctcgctttcccgatccccgggccctggccaaagccgacctctccgaa
gtggaggagctcatccattcgaccggattcttccgggcgaaggcgaaaaacctcgtggcg
atggcaaacttggtcgttgcgctccacgcgggtgaaattcccagcgatctcgacgccctg
accgccttaccgggcgtcgggcggaaaacggctcacgtcgtcctcggcaacgcgttcgcg
atcgcgtcgggagtggtggtcgacacccacgtcaaacggctctcatttcgactcggcctg
accacgaatcttgacccgatccaggtcgagcgcgacctcgccaagatcatcccgcgtaag
gagtgggtggacttcagccatcgcctgatcgagcacgggcggcgcacctgcgtggcaatc
cgcccacgatgcggcgaatgtgccatcgcctcgatctgcccgaagctgggagtgactctg
ccaacgtcgaaacgccttccaaaatag
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