Sinimarinibacterium sp. NLF-5-8: GT972_05585
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Entry
GT972_05585 CDS
T06400
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini01501
beta-Lactam resistance
sini01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GT972_05585
01503 Cationic antimicrobial peptide (CAMP) resistance
GT972_05585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sini03036
]
GT972_05585
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sini02000
]
GT972_05585
01504 Antimicrobial resistance genes [BR:
sini01504
]
GT972_05585
Chromosome and associated proteins [BR:
sini03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GT972_05585
Transporters [BR:
sini02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GT972_05585
Antimicrobial resistance genes [BR:
sini01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GT972_05585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
BSH_RND
YknX_C
BSH_YhbJ
HH_EMRA
Beta-barrel_RND_2
BSH_CusB
HH_YBHG
Biotin_lipoyl
BSH_YknX
RND-MFP_C
Peptidase_M23
BSH_Fcp1
Beta-barrel_YknX
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
QHS09682
LinkDB
All DBs
Position
1124048..1125115
Genome browser
AA seq
355 aa
AA seq
DB search
MNPRLLFALSASLLLLWGCKAATDASAPETTATPRAVRVAEVETGPALAPVIAIGAVAAR
DEARLAFKVGGVVRSISVRAGQSVRAGQVLATLETAEIDAAVAQAQAANDKAQRDLARGK
TLFAEDVLTQEQLDDLGTAAEVAKAQLSAAAFNRQYAQITAPADGRVLRRLAEPRELVAP
GQPILQLSQQGGGYTLRLNLPDRDFVNVGLGDPAQVQFDALPDQTFAARVIERGGAADPR
TGTFAAELLLDAKTAPLSSGLIGRARIQASGRNSDATRSYVPLIALVEGDSDAALLFILD
ADDRARAQKVAVAFIDGDRAALRKALPEGTRIITDGAAYVDDGAQVRVVDPAAGR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctcgtttgctgtttgcattgagcgcaagcctgctgctgctttggggttgcaaa
gccgcaaccgatgccagcgcgcccgaaaccaccgccaccccgcgcgcggtgcgcgttgcc
gaggttgaaaccggcccggcactggcgccggtgatcgccatcggcgcagtggcggcgcgc
gatgaagcccggctcgccttcaaggtgggcggcgtggttcgcagcatcagcgtgcgcgcc
ggccaaagcgtgcgcgccggtcaagtcctggcaacgctggaaaccgccgaaatcgacgcc
gccgtcgcccaggcccaggccgccaacgacaaagcccagcgcgaccttgcgcgcggtaaa
accctgtttgccgaagacgttctcacccaagagcaactggatgatctgggcaccgccgcc
gaggtggcaaaagcgcagctcagcgccgccgcattcaaccgccaatatgcacagatcacc
gcccccgccgatggccgcgtcctgcgccgcctggccgagccgcgtgaactggtggcgccc
ggacagccgattttgcagctcagccagcagggcggcggctacaccctcaggctcaatctg
ccggatcgggatttcgtcaacgttgggcttggcgatcccgcgcaggtgcaatttgatgcc
ctgcccgatcaaacctttgccgcgcgggtgatcgagcgtggcggcgccgccgacccgcgc
accggcacctttgccgcagaactgctgctggatgccaaaacggcgcccttgtccagcggc
ctgatcgggcgcgcgcgcatccaggccagcggccgcaacagcgatgccacgcgcagttat
gtgccgctgatcgcgctggttgaaggtgacagcgatgcggcgctgctgttcatccttgac
gcagacgaccgcgcgcgcgcgcaaaaagtggccgtggccttcatcgacggcgaccgcgcc
gcactgcgcaaagccctgcccgaaggcacccggatcatcaccgacggtgccgcctatgtg
gatgacggcgcgcaggtgcgcgtggtcgatccggcagccggtcgataa
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