Sinimarinibacterium sp. NLF-5-8: GT972_09010
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Entry
GT972_09010 CDS
T06400
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sini
Sinimarinibacterium sp. NLF-5-8
Pathway
sini00300
Lysine biosynthesis
sini00550
Peptidoglycan biosynthesis
sini01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sini00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GT972_09010
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GT972_09010
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sini01011
]
GT972_09010
Enzymes [BR:
sini01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GT972_09010
Peptidoglycan biosynthesis and degradation proteins [BR:
sini01011
]
Precursor biosynthesis
Amino acid ligase
GT972_09010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
MoCF_biosynth
YqeC
Motif
Other DBs
NCBI-ProteinID:
QHS10266
LinkDB
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Position
complement(1879160..1880647)
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AA seq
495 aa
AA seq
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MTAMTLAALLPESTDALQPITGVAIDSRRVQAGDLFLAVPGHDGKHGLDYLQQALAHGAV
AVAYDPAGARALPGASVPMVAVPGLGACAGELASRFYGQPSQSLFCVGITGTDGKTSTAY
LLAQALDALAQPCAYIGTIGVGRVGRLQTATHTTPDAASLHRTLAQMRAQGAQAAALEVS
SHALDQDRVAGVDFDVAVLTNITRDHLDYHGTLEAYIAAKRKLFERAEVKTVVLNQDDPQ
GRQWALSLPARAQRIVYGIDGEPCSAHYVIGRDLDLTPHGMTLTADTHCGRVTLHSPLLG
RFNAYNLLAVLAVLLARGVDLEHAARALAQLSTVPGRIEGFRGARAQPLVVVDYAHTPDA
LAQILQAVRAHCQGQLIAVFGCGGDRDTGKRPLMGAVAAQLADAVIVTDDNPRSEAPQAI
TDAIVAGIALDARARVQVIHDRAEAIARAVARAQANDVVVVAGKGHETTQTYGAEVRAFS
DRAFVAELLGSEVAA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgatgacgctggcggcactgttgcccgaatccaccgatgccctgcagccgatc
accggcgtggcgatcgactcacgccgggtgcaggcgggcgatctgtttttggcggtgccc
ggtcacgacggcaaacatgggctggactatctgcaacaagcccttgcgcacggcgcggtg
gccgtggcttacgaccctgcgggcgcgcgcgcgctgcccggtgcatcggtgccgatggtt
gccgtgcccggtctgggcgcgtgcgcgggcgaactcgccagccgcttttatgggcagccg
tcacagagcctgttttgcgtgggcatcaccggcaccgacggcaaaacctccaccgcttat
ttgctggcgcaggcgctggatgcgctggcgcagccctgcgcttacatcggcaccatcggt
gtcgggcgtgtggggcggttgcaaaccgccacccacaccacgccggatgccgccagcctg
caccgcacgctggcgcagatgcgcgcgcaaggcgcgcaagcggcggcgctggaagtctcc
agccacgcactcgatcaagaccgcgtggccggtgtggattttgacgtggcggtgctgacc
aacatcacccgcgatcatctggattatcacggcacgctagaggcgtatatcgccgccaag
cgcaagctgtttgagcgcgcagaagtcaaaaccgtggtgctcaatcaggacgatccgcag
gggcgccagtgggcgctgagcctgcccgcgcgcgcgcagcgcattgtttacggcattgat
ggtgaaccttgcagcgcgcactacgtcataggccgcgatctcgatctcacgccccacggc
atgacgctcaccgccgacactcactgtggtcgcgtcaccctgcacagtccgctgctgggg
cgctttaacgcctacaacttgctggctgtgctggcggtgctgctggcgcgcggggtggat
ttagaacacgccgcgcgcgcgctggcgcagttgagcaccgtgccggggcggattgagggc
tttcgcggcgcgcgcgcgcagcctttggtggtggtggattacgcccacacgccggatgcg
ctggcgcagattcttcaagccgtgcgcgcacactgccaggggcaactgattgccgtgttt
ggctgtggcggcgaccgcgacaccggcaaacgcccgctgatgggggcggttgccgcgcaa
ctggccgatgccgtgatcgtcaccgacgacaacccgcgcagcgaagccccgcaagcgatt
accgacgccatcgtcgccggcattgcccttgatgcgcgcgcgcgggtgcaggtgattcac
gaccgcgctgaggccattgcccgtgcggtggcgcgcgcgcaggccaatgacgtggtggtg
gtggcgggcaaaggccatgaaaccacgcaaacctacggtgccgaagtgcgcgcgttttcc
gatcgtgcgttcgtcgccgagctgctcggcagcgaggtggccgcatga
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