Streptomyces incarnatus: ABB07_11620 Help Entry ABB07_11620       CDS       T09785                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism sinn  Streptomyces incarnatus Pathway sinn03030   DNA replication sinn03410   Base excision repair sinn03420   Nucleotide excision repair sinn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:sinn00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     ABB07_11620    03410 Base excision repair     ABB07_11620    03420 Nucleotide excision repair     ABB07_11620    03430 Mismatch repair     ABB07_11620  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:sinn03032]     ABB07_11620    03400 DNA repair and recombination proteins [BR:sinn03400]     ABB07_11620 Enzymes [BR:sinn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      ABB07_11620 DNA replication proteins [BR:sinn03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      ABB07_11620 DNA repair and recombination proteins [BR:sinn03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      ABB07_11620    NER (nucleotide excision repair)     GGR (global genome repair) factors      ABB07_11620    MMR (mismatch excision repair)     DNA ligase      ABB07_11620   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       ABB07_11620 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 HHH Zn_ribbon_CLPX_N Zn_ribbon_TFIIB DUF8512 Motif Other DBs NCBI-ProteinID:  AKJ10636 UniProt:  A0ABN4GJQ2 LinkDB All DBs Position complement(2692105..2694297) Genome browser AA seq 730 aa AA seqDB search MAGDKQQAETAVPAEARDRHAQLAEQIEEHRFRYYVKDAPVISDAEFDKLLKTLEALEEQ YPELRTPDSPTQKVAGSYATEFTAVEHRQRMLSLDNTFNDEELAAWAERIARELGDQAYH FLCELKVDGLAVNLTYENGRLTRAATRGDGRTGEDITPNVRTIAEIPDRLKGDKVPGLVE IRGEVYFPMEKFLELNERLVAAGDKPFANPRNAAAGSLRQKDPRVTATRPLHMVVHGIGA LEGFTGLTRLSQAYDLLKTWGLPTSPHNRVVDDLDGVRKFIAHYGENRHSVEHEIDGVVV KLDEIRLQGRLGSTARAPRWAIAYKYAPEEVNTKLIDIKVGVGRTGRVTPYAQVEPVTVA GSEVEFATLHNQEVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFVMPGECP ECGTPLRPMKEGDIDLRCPNARTCPAQLRERVSYLAGRECLDIEHFGEVAAAALTRPLEP ADPPLVDEGDLFDLTVEKLLPIKAYVLDPDSGLPKRDPRTGEEKVVTVFANQKGEPKKNT LALLENIEAAKSRPLARFLNGLSIRHVGPVAAQALAREFRSVDRIEQATEEELATTDGVG PIIAAAVKEWFAEDWHREIVRKWKAAGVPLEDASTSEDEGPRPLEGLTVVVTGTLENFTR DGAKEALQSRGAKVTGSVSKKTSFVVVGDNPGSKYDKAMQLKVPVLNEDGFGVLLEQGPD AAAEVALTTE NT seq 2193 nt NT seq  +upstreamnt  +downstreamnt gtggccggcgacaagcagcaggcggagacggcagtgcccgccgaggcacgtgacaggcac gcgcagctcgctgagcagatcgaggagcaccgcttccggtactacgtcaaggacgctccc gtcatcagcgacgccgagttcgacaagctcctgaagactctggaggccctggaggagcag tatccggagctgcgcaccccggactcgccgacccagaaggtcgcggggtcgtacgcgacg gagttcaccgccgtcgagcaccgccagcggatgctgtcgctcgacaacaccttcaacgac gaggagctggccgcctgggccgagcgcatcgcgcgcgaactcggcgaccaggcctaccac ttcctgtgcgagctgaaggtggacggcctcgcggtcaacctgacctacgagaacggccgg ctcacacgcgcggcgacccgcggcgacggccgtaccggcgaggacatcacccccaacgtg cggacgatcgcggagatcccggaccgcctgaagggcgacaaggtgcccggcctggtggag atccgcggggaggtctacttcccgatggagaagttcctcgaactgaacgaacgcctggtc gccgccggggacaagccgttcgccaacccccgcaacgccgccgccggttcgctgcgccag aaggacccgcgggtcaccgccacccgcccgctgcacatggtcgtccacggcatcggcgcc ctggagggcttcacgggcctgacccgcctctcccaggcctacgacctgctgaagacctgg ggcctgcccacctccccgcacaaccgcgtggtcgacgacctcgacggcgtacggaagttc atcgcccactacggcgagaaccgccactccgtggagcacgagatcgacggggtcgtcgtc aagctggacgagatccgcctccagggccgcctcggctccaccgcgcgtgccccgcgctgg gcgatcgcctacaagtacgcgccggaggaggtcaacaccaagctcatcgacatcaaggtg ggcgtgggccgcaccggccgcgtcacgccgtacgcccaggtcgagccggtcacggtcgcg ggcagcgaggtggagttcgccaccctgcacaaccaggaggtcgtcaaggccaagggcgtg ctcatcggcgacaccgtcgtcctgcgcaaggccggtgacgtcatcccggagatcctcggc ccggtggtcgatctcagggacggcagcgagcgggagttcgtgatgccgggcgagtgcccc gagtgcggcaccccgctccggcccatgaaggagggcgacatcgacctccgctgccccaac gcccgtacctgcccggcccagttgcgcgagcgggtctcctacctcgcgggccgtgagtgc ctggacatcgagcacttcggcgaggtggccgccgccgcactcacccgcccgctggagccg gccgacccgccgctggtggacgagggcgacctgttcgacctgacggtggagaagctgctg cccatcaaggcctatgtcctcgaccccgacagcggtctgcccaagcgggaccccaggacg ggcgaggagaaggtcgtcacggtcttcgccaaccagaagggcgagccgaagaagaacacc ctcgccctgctggagaacatcgaggcggccaagtcccgccccctcgcccgcttcctgaac gggctgtccatccggcacgtcggaccggtcgccgcgcaggccctcgcccgcgagttccgt tccgtcgaccgcatcgaacaggccaccgaggaagagctcgcgaccaccgacggggtcggc ccgatcatcgccgccgcggtcaaggaatggttcgccgaggactggcaccgcgagatcgtg cgcaagtggaaggccgccggagtcccgctggaggacgcctcgaccagcgaggacgagggc ccgcgcccgctggaggggctcacggtcgtcgtcaccggcacgctggagaacttcacccgc gacggcgcgaaggaggcgctgcagagccggggcgcgaaggtgaccggatctgtttcgaag aagacctcgtttgtcgtcgtgggtgacaacccgggatcgaagtacgacaaagccatgcaa ttgaaggtcccggtcctgaacgaggacggtttcggcgtcctcttggagcagggccccgac gcggcggccgaagtcgcgcttacgaccgagtag

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