Ruegeria sp. TM1040: TM1040_2389
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Entry
TM1040_2389 CDS
T00359
Name
(GenBank) Isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TM1040_2389
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sit01007
]
TM1040_2389
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sit03016
]
TM1040_2389
Enzymes [BR:
sit01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
TM1040_2389
Amino acid related enzymes [BR:
sit01007
]
Aminoacyl-tRNA synthetase
Class I (U)
TM1040_2389
Transfer RNA biogenesis [BR:
sit03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TM1040_2389
Prokaryotic type
Other AARSs
TM1040_2389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ABF65121
RoseoBase:
TM1040_2389
UniProt:
Q1GDZ5
LinkDB
All DBs
Position
2508425..2511349
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AA seq
974 aa
AA seq
DB search
MCADKTEVTPEYKNTLNLPKTDFPMRAGLPKREPAWLERWEKIGVYDRLREKEGRQPFVL
HDGPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDSRYVPGWDCHGLPIEWKIEEQYRKK
GKNKDAVPVIEFRQECRKFAEGWIDIQREEFKRLGITGNWPNPYITMDYHAEAVIAEEFM
KFLMNGTLYQGSKPVMWSPVEKTALAEAEVEYHDKESFTIWVKFKVVEPADHKLAGAQVV
IWTTTPWTIPSNKAVVYGADIAYGLYEVTGTPDECWATVGDKYLLADNLAADVFKRARLS
EDQYKRVADVSAEDLAGIGLAHPLAGSEGSEGEWDGIRDFRAAPFVTDTEGTGFVHCAPS
HGMEEFELYRDLGMLEQMITYNVMDDGGFRADLPFFGGKYILNRKGGEGDANKAIIDKLV
EVGGLLARGKIKHSYPHSWRSKAPIIYRNTPQWFAGVDRKLDDGMGDYGDTIRERALRSI
DELVKWTPQTGRNRLYSMIENRPDWVLSRQRAWGVPLTCFTKKGALPTDADYLLRNSEVN
ARIIAAFEENGADVWYEDGFKEKVLEGIVAPDDYEQVFDVLDVWFDSGSTHAFVLRDRED
GTEDGIADVYMEGTDQHRGWFHSSLLQASATKGRAPYRNVVTHGFTLDEKGMKMSKSLGN
TIVPEEIVKQYGADILRLWVAQTDYTADQRIGAEILKGTADSYRRLRNTMRYMLGSLSDF
NEDQRVEPADMPELEQWVLHRLAELDRTVKAGYKAFDFNGVWQAIFNFATVDLSAFYFDI
RKDALYCDGDTLNARAARTVLDILFHRLTTWLAPILVFTMEEVWLERFPGEESSVHLVDM
PETPRDWINEPLAAKWAKVRQARRVVTAALEVQRTDKVIGASLEAAPVVHVREADVLEAL
KSVNFADVCITSDVQLTNDPSPAEAYRLPEVDGVSVVFEKAEGEKCQRCWKILPDVGSHA
HPGTCGRCNSALGG
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgccgataagaccgaagtcacgcccgaatacaaaaacacgctaaatctgcccaaa
accgatttccccatgcgcgcaggcctgcccaagcgcgagcccgcatggctggagcgttgg
gaaaagatcggcgtctatgaccgcctgcgcgaaaaggaaggccgtcagccgtttgtgctg
cacgacggtccgccctacgcaaacggccacctgcatatcggtcacgcgctcaacaagacc
atcaaggatatgatcgtccgctcgcatcagatgatgggttttgacagccgctatgtgccg
ggctgggactgccacggcctgccgatcgagtggaaaatcgaagagcagtaccgcaagaag
ggcaaaaacaaggacgcggtgccggtcatcgagttccgtcaggagtgccgcaaattcgcc
gagggctggatcgacatccagcgcgaggagttcaagcgcctgggcatcaccggcaactgg
cccaatccctatatcaccatggattatcatgccgaggcggtgatcgccgaggaattcatg
aaattcctgatgaacggcacgctctatcagggctccaagcccgtgatgtggtcgccagtt
gaaaaaaccgcgctggccgaggccgaggtcgaatatcacgacaaggaaagcttcaccatc
tgggtgaaattcaaggtggttgaacctgccgatcacaagctggccggggcgcaagtggtg
atctggaccacgactccctggaccatcccttcgaacaaggctgtcgtctacggtgcggac
attgcatatggcctctacgaggtcacaggtacgccggacgagtgctgggccacagtgggc
gacaaatacctgcttgccgacaatctggccgcggatgtgttcaaacgcgcgcgtctctcg
gaagatcaatataagcgcgttgcagatgtgtctgcagaggatcttgcaggcatcggcctt
gcgcatccgctcgcgggttctgaaggctccgaaggcgaatgggacggcatccgtgatttc
cgcgccgcgccctttgtgaccgacaccgaaggcaccggttttgtgcactgcgcgccgtcg
cacggtatggaagaattcgaactctatcgtgatctcggcatgctggagcagatgatcacc
tacaacgtcatggacgacggaggctttcgcgccgatctgccgttctttggtggcaaatat
atcctgaaccgcaaaggcggcgaaggggatgccaacaaggcgatcatcgacaagctggtc
gaggtcggcggccttctggcgcgcggcaagatcaagcacagctatccgcattcctggcgc
tccaaggcaccgatcatctatcgcaacacgccacagtggtttgccggtgtggatcgcaag
ctagacgacggcatgggcgactatggcgacaccatccgcgaacgcgcactgcgttccatc
gacgagctggtgaaatggaccccgcagaccggccgcaatcgtctctattcgatgattgaa
aaccgtccggattgggtgctgtcgcgccagcgcgcctggggtgtgccgctcacctgcttt
acgaagaagggtgctctgcctacggacgcggattacctgctgcgcaacagcgaggtgaac
gcccgcatcatcgccgcctttgaggaaaacggcgccgatgtctggtacgaggacggcttc
aaggagaaggtgctcgagggcatcgtggccccggacgactacgagcaggtctttgacgtg
ctggatgtgtggtttgattcaggctccacccacgcctttgtgctgcgcgaccgcgaggat
ggcaccgaggacgggattgccgacgtctatatggaaggcactgaccagcaccgcgggtgg
ttccactcctcgctgctgcaggcctctgccaccaaaggccgcgcgccctatcgcaatgtg
gtgacgcatggctttacgctcgacgagaagggcatgaaaatgtccaagtcgctcggcaac
accatcgtccccgaggaaatcgtcaagcaatacggcgcagacatcctgcgtctctgggtg
gcgcagaccgattacaccgccgatcagcggatcggggcagaaatcctcaaagggactgcc
gacagctaccgcaggctgcgcaacaccatgcgctatatgctcggcagcctcagcgacttc
aacgaggatcagcgggtagagcctgcggatatgccggaactggagcaatgggtcctgcat
cgcctggccgagctcgatcgcaccgtgaaggcaggctataaagcgtttgatttcaatggt
gtatggcaagcgattttcaactttgccactgtggatctgtcggccttctacttcgatatc
cgcaaggacgcgctctattgcgatggcgacacgctgaacgcccgtgcggcgcgcaccgtg
ttggacatcctgttccaccgcctgaccacatggctggcaccgatcctcgtgttcacgatg
gaagaggtttggctcgagcggttcccgggcgaagaaagctccgtgcaccttgtcgatatg
cccgaaacaccgcgtgattggatcaacgagccgctcgcagccaaatgggccaaagtccgt
caggcgcgccgcgtcgtgaccgccgctctggaagtgcagcgcacagacaaggttatcggc
gcctcgctcgaggcagcacctgtcgtgcatgtgcgcgaggcggacgttctggaggccctg
aagtcggtgaattttgccgacgtctgcatcacctctgacgtgcaactcaccaatgatcca
agtccggcagaggcctatcgcctgccagaggtcgatggtgtgtctgtggtgtttgaaaaa
gccgaaggggagaagtgccagcggtgctggaagatcctacccgatgtgggcagccacgcg
catcccggcacctgtggacgctgcaacagcgctctgggcggctga
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