Ruegeria sp. TM1040: TM1040_2736
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Entry
TM1040_2736 CDS
T00359
Name
(GenBank) transketolase; putative
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00010
Glycolysis / Gluconeogenesis
sit00020
Citrate cycle (TCA cycle)
sit00620
Pyruvate metabolism
sit00785
Lipoic acid metabolism
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01120
Microbial metabolism in diverse environments
sit01200
Carbon metabolism
sit01210
2-Oxocarboxylic acid metabolism
Module
sit_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
TM1040_2736
00020 Citrate cycle (TCA cycle)
TM1040_2736
00620 Pyruvate metabolism
TM1040_2736
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
TM1040_2736
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
TM1040_2736
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Gene cluster
GFIT
Motif
Pfam:
Transketolase_N
PDH_E1_M
Transketolase_C_1
DXP_synthase_N
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
ABF65468
RoseoBase:
TM1040_2736
UniProt:
Q1GCZ8
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Position
complement(2879545..2881929)
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AA seq
794 aa
AA seq
DB search
MSQNIEHLRTVEQRLLWLSHWMIHNANHLRAKEDGIKIGGHQASSASMVSIMTALYFSAL
RPEDRVAVKPHASPIFHAMQYLMGHQTREKMENFRGYGGVQSYPSRTKDIDDVDFSTGSV
GLGVGITALASMVQDFITAKDWGGDVTPGRMVALVGDAELDEGNIYEVLQEGWKNDLRNT
WWIIDYNRQSLDGIVREGLFGRIEKIFEAFGWDVVRVKYGALQRAAFEEPGGEALRDWID
ACPNVEYSALTYMGGANWRKRLMEDLGDQGAVSALIDKRSDAELAALMENLGGNCVETMA
DTFAAIDHDRPTCFLAYTIKGWGTPIAGHKDNHGGLMTKAQMAEWQTHMGVAEGEEWELM
ATVSDTKGFQAYLDQVPFFAKGARRHSDARLSVPAVAVDTSREISTQMAFGKILDDLARG
DSDLAARIMTTSPDVTGTTGLGPWVNRRKLFAREAQKDAFIEHRIPSTAKWNFDPKGQHL
ELGIAEMNLFLLLGAAGLSHSLWGKRVIPIGTVYDPFVHRGLDALNYACYQDARFMIVGT
PSGVTLAPEGGAHQSVGTPLTGMAQDGLASFEPAFADELAVIMEWAFDYMQRDGEGDPDE
RTWLRDETGGSVYLRLTTKPLEQPGQRVDDAFRQGAIDGAYWLRKPGPNCSVVIAYQGAV
ADEAIAAAGLVGEHRRDVAVLAVTSADRLNAGWTAAQRERARGNPQAVSHVERLLGELPA
HCTLITAIDGHPATLSWLGSVAGHRVVSHGVEHFGQTGTIGDLYRHFGLDRHSLARSVGE
LTTGARRIPGGQAG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaacattgaacatctgagaacggtggagcagcgactgttgtggctgtcccat
tggatgatccacaacgccaaccatttgcgcgccaaggaggacggcatcaagatcggtggc
catcaggcgtcttctgcgtcgatggtgtcgatcatgaccgcgctctacttctcggcgctt
cgccccgaggaccgggtggcggtcaagccgcatgcctcgcccatctttcacgccatgcaa
tacctcatgggccaccagactcgcgagaagatggagaacttccgcggctacggcggtgtg
caaagctacccgagccgcaccaaggatattgacgatgtggacttctccaccggctctgtg
ggccttggcgtggggatcaccgcgcttgcgtcgatggtgcaggatttcatcaccgcaaag
gactggggcggcgatgtcactccgggccggatggtggcgcttgtgggcgatgccgagctt
gatgagggcaatatctatgaggtcttgcaggagggctggaagaacgacctgcgcaatacc
tggtggatcatcgactacaaccgccagagccttgatggcatcgtgcgcgaggggctgttt
ggccggatcgagaaaatcttcgaggcgttcggctgggatgtggtccgggtgaaatatggc
gccctccaacgggccgcctttgaggaacccggcggcgaggccctgcgtgactggatcgac
gcctgcccgaacgtggaatactccgcgctgacctatatgggcggggccaactggcgcaaa
cgcctgatggaggatctgggcgaccagggcgcggtctcggcactgatcgacaagcgcagc
gacgcggaactggcggcgctgatggagaacctcggcggcaattgcgtggaaacgatggcc
gatacattcgccgccatcgaccacgaccgtccgacctgctttctggcctacacaatcaag
ggctggggcacgccgattgcgggccacaaggacaaccacggcggcctcatgaccaaggcg
cagatggccgagtggcagacccatatgggtgtggccgagggcgaggagtgggagctgatg
gcgaccgtttctgacacgaagggctttcaggcctatctcgatcaggtgccgttttttgcc
aagggcgcgcggcgccactcggacgcgcggctttcggtgccggcggttgcggtggacaca
agccgcgagatttcaacgcagatggcctttggcaagatccttgacgatctggcgcgcggc
gacagcgatcttgcggcgcggatcatgaccacctctccggatgtgaccggcaccacgggg
cttggtccatgggtcaatcgccgcaagctctttgcgcgagaggcccaaaaggacgccttt
atcgaacatcgcattccctcgacggccaagtggaattttgaccccaagggccagcatctc
gaactgggtatcgcggagatgaacctgttcctgctgctgggcgcggcgggcctgtcgcac
agtctctggggcaagcgggtgatcccgattggcacggtttatgatccctttgtgcaccgg
ggcttggatgcgctcaactacgcgtgctatcaggatgcgcgcttcatgatcgtcggcacg
ccctcgggggtgacgctggcgccggagggcggcgcgcatcaatccgtgggcacgcccctt
acgggcatggcgcaggatgggcttgcgagttttgaaccggcctttgccgatgagctcgcg
gtcattatggaatgggcttttgactacatgcagcgcgatggcgaaggcgacccggacgag
cgcacctggctgcgcgatgaaaccggcggatcggtctatctgcgcctgaccaccaaaccg
ctcgaacagccggggcaacgggttgatgatgccttccgtcagggggccattgatggggcc
tattggctgcgcaagccggggccgaactgttcagttgtgatcgcctatcaaggtgcggtc
gcggatgaggcgattgcggcggcaggtctggtcggtgagcatcgccgcgacgttgccgtt
ctggcggtgacctcggcggatcgtctcaatgcaggctggaccgccgcgcagcgggaacgg
gcgcggggcaacccgcaggcggtgtcgcatgtggagcgtctcttgggggaactgcctgcc
cattgcaccctgatcaccgcgattgatggtcatccggcgacgctctcgtggctgggctcg
gttgcagggcatcgggttgtgtcgcatggggtcgagcatttcggccagaccggcaccatc
ggggatctttaccgtcacttcggtctcgatcggcacagcctcgcgcgttccgtgggcgag
ctcaccacgggcgcgcgccgcatccccggcgggcaggcgggctag
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