KEGG   Ruegeria sp. TM1040: TM1040_3618
Entry
TM1040_3618       CDS       T00359                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
sit  Ruegeria sp. TM1040
Pathway
sit00270  Cysteine and methionine metabolism
sit00450  Selenocompound metabolism
sit00670  One carbon pool by folate
sit01100  Metabolic pathways
sit01110  Biosynthesis of secondary metabolites
sit01230  Biosynthesis of amino acids
sit04980  Cobalamin transport and metabolism
sit04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:sit00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    TM1040_3618
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    TM1040_3618
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    TM1040_3618
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    TM1040_3618
   04980 Cobalamin transport and metabolism
    TM1040_3618
Enzymes [BR:sit01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     TM1040_3618
SSDB
Motif
Pfam: Met_synt_B12 Pterin_bind B12-binding_2 B12-binding CdhD MtrH
Other DBs
NCBI-ProteinID: ABF62585
RoseoBase: TM1040_3618
UniProt: Q1GL81
LinkDB
Position
mega:672806..675547
AA seq 913 aa
MSEPLLRLSGLEPFVLTKDIPFVNVGERTNVTGSARFRKLITNRDYATALDVARDQVENG
AQIIDINMDEGLIDSKQAMIDFLNLVAAEPDIARVPIMIDSSKWEVIEAGLQCVQGKPIV
NSISLKEGEESFLHQASLCLAYGAAVVVMAFDEQGQADSFERKIEICARAYKILTEQVGF
PPEDIIFDPNVFAVATGIEEHDNYGVDFIEATRWIRENLPHCHVSGGVSNLSFSFRGNEP
VREAMHAVFLYHAIKVGMDMGIVNAGQLAVYDQIDPELREACEDVVLNRTPKAGGSATEN
LLDIAERFKGGTREEKKRDLTWRQWPVEKRLEHALVNGITEFVEEDTEEARQAAERPLHV
IEGPLMDGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAVLLPYMEEEKRQNGGGGKDTAG
TVLMATVKGDVHDIGKNIVGVVLACNNFEIIDLGVMVPPQKILEEARVHNVDVIGLSGLI
TPSLDEMVHLASELEREGFDIPLLIGGATTSKVHTAVKIAPQYERNQAIYVTDASRAVGV
VSSLLNDTQRDSYVADIQREYKEVAERHERAERAKTRLPLTAARENAMQIDWSGYQVKAP
EFTGARVVDDWDLAEIAQYIDWTPFFQTWELKGVYPRILEHEKYGEAARALFKDARAMLD
RIITEQWFKPRAVVGFWPANRKGDDIRLFKDDTREEELATFFTLRQQTSKRKSSPNLALA
DFVAPEGVADWVGGFVVTTGPEEVEIAERFEKAGDDYSAIMVKALADRYAEAMAEMLHER
VRRDYWGYAPTEAFAPEELIGEPYRGIRPAPGYPAQPDHTEKLTLFELLDAEVATGVTLT
ESMAMWPGSSVSGIYIGHPEAYYFGVAKVEQDQVADYAKRKGLSQDEAERWLMPILNYHP
GGRTGDQDEIAAQ
NT seq 2742 nt   +upstreamnt  +downstreamnt
atgtctgaaccactgctgcgtctctccggcctcgagccctttgtgcttaccaaggacatt
ccctttgtgaacgtaggggagcggaccaatgtcaccggatctgccaggtttcggaagctg
atcaccaatcgcgactatgccaccgcactggacgttgcccgcgaccaggtcgaaaacggc
gcccagattatcgacatcaacatggatgagggtcttatcgactccaagcaggcgatgatc
gactttctgaacctcgtggccgctgaacccgacatcgcgcgggtgccgatcatgatcgac
agctcgaaatgggaggtgatcgaagcaggtctgcaatgtgtgcagggcaaaccgatcgtg
aactccatctcgctcaaggaaggcgaggagagtttcctgcatcaggcaagcctctgcctt
gcgtatggcgcggccgtggtggtgatggcctttgacgagcaggggcaggccgacagtttc
gagcgcaagatcgagatctgcgcgcgcgcctacaagatcctcaccgagcaggtgggtttc
ccacccgaagacatcatctttgatcccaatgtgtttgcggtggcaaccgggattgaggaa
catgacaattatggcgtcgattttatcgaggcgacgcggtggatcagggaaaatctgccg
cactgtcatgtctcgggcggggtgtcgaacctgtcgttcagtttccgcgggaacgagcca
gtacgcgaagcgatgcatgcggtgttcctttatcacgccatcaaggttggcatggatatg
gggatcgtcaacgcaggccaactggcggtctatgatcagatcgacccggaactgcgggag
gcctgcgaagatgttgttctgaaccgcacccccaaagccggcggctccgcgaccgagaac
cttctggatattgcagagcgctttaagggtggcacacgggaagagaagaaacgtgacctg
acatggcgccaatggccggtcgaaaagcggcttgaacatgctctggtcaacgggatcacg
gaattcgtcgaggaagacactgaagaggcccgccaagcggctgagcgccctcttcatgta
atcgaaggcccgcttatggacgggatgaacgtggtgggcgatctctttggggcgggtaag
atgtttctgccgcaagtggtcaaatccgcccgcgtcatgaaacaggccgtggccgtactt
cttccgtatatggaagaagaaaaacgtcaaaacggtggtggtggcaaggacaccgcgggc
actgtcctgatggcaacggtcaaaggtgacgtacacgacatcggcaagaatatcgttggt
gtggttttggcctgtaacaacttcgagatcatcgatcttggggtgatggtgccgccacaa
aagatcctcgaggaagcgcgggtgcataatgtcgatgtgattggcctttctggtctcatt
acgccctcgctcgacgagatggtgcatcttgcctctgaactggagcgtgagggctttgac
attccgctactgatcgggggggcgaccacttccaaggtgcatacggcggtgaaaatcgcc
cctcaatatgagcgcaaccaggcgatctatgtcaccgatgcaagccgtgctgtcggggtg
gtctcttcacttctgaacgacacccagcgggacagctatgtcgctgatatccagagggaa
tataaagaagttgccgagcgccacgaacgtgccgagcgcgccaaaacccgtttgccactg
acggcggcgcgggaaaatgcgatgcagatcgactggagcggctatcaggtcaaagcgccc
gaattcactggcgcccgagtggtcgacgactgggatctcgcggaaatcgcgcagtatata
gactggacgcccttctttcagacatgggagttgaaaggcgtttacccccggattctggag
catgaaaaatacggcgaggctgcgcgcgcgttgttcaaggatgcgcgggcgatgctcgac
cggatcatcacggaacagtggttcaaaccgcgcgcagtagtggggttttggcctgcaaat
cgtaaaggcgatgatattcgcctctttaaggatgacacacgggaagaggagctggccacg
ttcttcacgctgcgccagcagacctccaagcgcaagagcagcccaaatctcgcattggcg
gatttcgttgctcccgaaggcgtggctgactgggttggagggtttgtcgtgaccacaggc
ccagaagaggtcgagatcgccgaacgctttgaaaaggctggcgatgattatagcgcgatc
atggtgaaggcgcttgcggatcgctacgccgaggccatggccgagatgctgcatgagcgg
gtgcgccgggactattggggctatgctccgacagaggcttttgcccctgaggagctgatc
ggagagccctatcgtggcattcgtcccgccccaggctacccggcgcagcccgatcatacc
gaaaagctcaccctcttcgaactcctcgatgcagaagtggccacgggtgtgaccttgacc
gaaagcatggcgatgtggccaggatcctcggtttccggcatctatatcggtcatccggag
gcctattatttcggcgtcgccaaggtcgaacaggatcaggtcgcggattacgccaagcgc
aaagggctctctcaagatgaggcagagcgctggctgatgccgatcttgaattatcacccg
ggtggtcgcacgggagatcaagacgaaatcgcagcgcagtaa

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