Setaria italica (foxtail millet): 101763657
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Entry
101763657 CDS
T02818
Name
(RefSeq) E3 ubiquitin-protein ligase SRFP1 isoform X1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101763657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101763657
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101763657
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101763657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CHY
zinc_ribbon_6
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
101763657
NCBI-ProteinID:
XP_004984392
UniProt:
K4AE18
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All DBs
Position
IX:46423331..46427316
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AA seq
256 aa
AA seq
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MEHDAEARRGFARMGFGCKHYRRRCRIRAPCCGDVFHCRHCHNESTKDGHELDRHAVQSV
ICLVCDTEQPVAQVCCNCGVCMGEYFCATCKFFDDDVDKEQYHCKDCGICRVGGKENFFH
CQKCGSCYSTTLRDKHCCIENSMKNNCPICYEYLFDSLRETSVLRCGHTMHLQCFHEMLK
HDKFSCPICSTSIFDMDKFLRALDAEMEASYFYMGKGWIVCNDCRDTTRVFSGVAGHKCC
HCQSHNTCRVGPPVLP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgacgccgaggcgcgccgcggcttcgccaggatgggcttcgggtgcaagcac
taccgtcggaggtgccggatccgcgcgccctgctgcggcgacgtcttccactgccgccat
tgccacaacgagtccacgaaagacgggcacgagctggacaggcacgccgtccaatcggtc
atctgccttgtttgcgacaccgagcagccggttgcgcaggtgtgttgcaactgcggagtt
tgcatgggggagtacttctgcgcgacgtgcaagttcttcgacgatgacgttgacaaggag
cagtatcattgcaaagactgcggcatctgcagagttggagggaaggaaaacttcttccac
tgccagaagtgtggatcgtgctactcgactaccctgcgcgacaagcactgctgcatcgag
aactcgatgaagaacaactgccccatctgctacgagtacctgtttgattctttgagggag
acgtctgtgctccggtgtgggcacacgatgcacttgcagtgcttccacgagatgttgaag
cacgacaagttctcttgtcccatatgctcgacgtccatctttgacatggacaagttcctg
agggccctggatgcagagatggaagcaagctacttttacatgggaaagggatggatcgtg
tgcaacgactgcagggacacgacgcgggtcttctccggcgtggcgggccacaagtgctgc
cactgccagtcgcacaacacctgcagggtcggcccccctgttcttccctag
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