KEGG   Setaria italica (foxtail millet): 101764907
Entry
101764907         CDS       T02818                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101764907
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101764907
Spliceosome [BR:sita03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101764907
 Complex B
    101764907
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    101764907
SSDB
Motif
Pfam: SMN_Tudor TUDOR Agenet BAHCC1-like_Tudor RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 101764907
NCBI-ProteinID: XP_004951363
UniProt: K3YUI7
LinkDB
Position
I:2188664..2193246
AA seq 297 aa
MEDLSVEELASNLSTYKDQLREVKKLIKEKKDDPGISEYLDMEKELQEVIMLTEELLATA
KQAEGAQNVAGLSPPNYSAGMQSEGLGDLSHSHKFAVGTRVQAVWSEDGEWYNATVEALT
PNGYYVAYDGWGNREEVDPDNVRLLEEEAADALRQAEKEAEATKMAIKRKIEQAATSDFQ
ARSLPAKLRIEPSDPEDVKAAKRKKIHAFKSKARFEQLEFAQNKRQNAWQQFQTTKGKAK
KVGFFSGRKKESIFKSPDDHRGKVGVTGSGKGLTDFQRREKHLHLKGGSADALDDEE
NT seq 894 nt   +upstreamnt  +downstreamnt
atggaggatctgagcgtggaggagctcgcctccaacctctccacatacaaggaccagctc
cgcgaggttaagaaacttattaaggagaaaaaggatgaccctggaatttccgaatatctt
gatatggagaaagagcttcaggaggtcattatgttaacagaagagcttttagcaactgca
aagcaagctgagggtgcccagaacgttgcaggtctatcaccgccgaattattcggctgga
atgcagtcagagggactgggtgacctttcacattcacataagtttgcggttgggactaga
gtgcaagccgtgtggagcgaagatggggaatggtataatgcaacagttgaagctttgaca
ccaaatggatattacgtagcctacgatggctggggaaacagggaagaggtggacccagat
aatgtgaggctgcttgaggaagaagctgctgatgctttgcgacaagctgaaaaggaagct
gaagccacaaaaatggcaataaagaggaaaattgaacaagcagccacatctgattttcag
gcgcggagcttgcctgccaaacttcgtattgaaccaagtgatcctgaggatgttaaagct
gcaaagcgtaagaaaatacatgctttcaaatcgaaagcccgctttgagcaacttgaattt
gcacaaaacaagcggcagaatgcatggcagcagtttcaaacaaccaaggggaaagctaaa
aaggtagggttcttctccggtcgcaagaaggagagcatcttcaagtcacccgatgaccac
agaggtaaggtgggtgtcactgggagtggcaaaggcctgaccgatttccagaggagggag
aagcatctgcacctcaagggtgggtctgcagacgcattggatgacgaggaatag

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