Setaria italica (foxtail millet): 101773457
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Entry
101773457 CDS
T02818
Name
(RefSeq) transcription factor APG
KO
K12126
phytochrome-interacting factor 3
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04075
Plant hormone signal transduction
sita04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
101773457
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101773457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101773457
Transcription factors [BR:
sita03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101773457
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Motif
Pfam:
HLH
bHLH_LHW
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
101773457
NCBI-ProteinID:
XP_004960433
UniProt:
K3Z4X6
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Position
III:3565496..3568627
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AA seq
577 aa
AA seq
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MGRPRPHLFLQTHPSLASAPAAAAVGGASLFLNCSPTSLLLPPSHAHKQQQFVLACAPTS
NSLSSPLCSPAPRHRSSSSVRSILLHLSPRGARMIGPGDELAELLWDNGPALRRAPPPFQ
PFTCSAAGSSRAHELKRHAAAAAGMASVPLGAHDAGGFPVHDDDDAVPWLHCPVIVDDGD
TAPLPPEYCAGLLSEYPGLPGAAPPASPHHGAAVPASRAAPPEAAAKQAPPSAGEGVMNF
TFFSRPLQQRPQASAAAAPSNPVESTVVQAATNRLRSTPLFSEQRMAWLQPPKAPRATAA
GAPPAPQAPLPPELRHGEAATVTQRRLQPEARAPDAAAGPAAVTTSSVCSGNGDRSQPKR
SSHHQLPDCSVSPDEDLDDEGGATRRSESRSNKRSRTAEVHNLSERRRRDRINEKMRALQ
ELIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGLCVPPMLLPAMQMPHPMAAHFPH
LGMGLGFSMGAAAAAFDMARAAGVHFPCPPMAMPPGPMFGVPGQAMPPPAAAAFAHMATA
PPEQMEVAPARRGAEADQPPVPVVTQGDQKQQHPKQT
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgccctcgtccccacctcttcctgcaaacccatccatcactggcctcggctcct
gctgctgctgcggtaggtggcgcgtcgctcttccttaactgctcgcccacctctcttctc
cttcctccatcccacgcacacaagcagcaacagttcgtgctagcttgtgctccgacctcc
aactccctatcctctccgctctgctcgcccgcgccaaggcacaggagcagcagcagcgtg
cgctccatcctgctccacctgtcgccgcgcggcgctcggatgatcgggccgggcgacgag
ctggccgagctgctctgggacaacgggccggcgctgaggagggcgccgccgccgttccaa
cccttcacctgcagcgccgccggcagcagcagggcccacgagctcaagcgccacgccgcc
gctgccgccggcatggcctccgtaccgctcggggcgcacgacgccggcgggttccccgtc
cacgacgacgacgacgccgtgccgtggctgcattgccccgtcatcgtcgacgacggcgac
acggcgccgctgcccccggagtactgcgccggcctgctgtccgagtacccgggcctcccc
ggcgccgcgccgcccgcctccccccaccacggcgcggccgtcccggcctcccgcgccgcg
ccgccggaggccgcggccaagcaggccccgccgagcgccggtgagggcgtcatgaacttc
accttcttctcgcgtcctctgcagcagcggccgcaggcgtccgccgccgcggccccgagc
aaccccgtcgagtccacggtcgtgcaggcggcgacgaaccggctgcggagcaccccgctg
ttctcggagcagaggatggcgtggctgcagccgcccaaagcgccgcgcgccacggcggca
ggggcacctcctgccccccaggcgcctctgcccccagagctccgccacggagaagccgcc
acggtgactcaacgcaggttgcagccggaagcgagggctcccgatgcggccgcgggaccg
gcggcggtgaccacctcgtcggtctgctccggcaacggtgaccggagccagcccaagagg
agcagccaccaccagctcccggactgctccgtcagcccggacgaggacctcgacgacgag
ggcggcgcgacgaggaggtcggagtcgcggagcaacaagcggagccgcaccgccgaggtg
cacaacctatcggagaggaggagacgagaccggatcaacgagaagatgcgcgccctgcag
gagctcatccccaactgcaacaagatcgacaaggcgtccatgctggaggaggcgatcgag
tacctgaagaccctgcagctgcaggtgcagatgatgtcgatggggacgggtctgtgcgtg
ccgccgatgctgctgccggcgatgcagatgccgcaccccatggcggcgcacttcccccac
ctcggcatggggctggggttcagcatgggcgcggcggcggcagccttcgacatggcccgc
gctgccggcgtgcacttcccgtgcccgccgatggcaatgccgccagggccgatgttcggc
gtgcccgggcaggcgatgccgccgccggccgcggcggcgttcgctcacatggccaccgcg
ccgcccgagcagatggaagttgctcctgcacggcgaggagcagaagcggaccaaccgccg
gttcccgtcgtcacacagggcgatcagaagcagcagcatccgaagcagacgtga
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