Setaria italica (foxtail millet): 101780408
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Entry
101780408 CDS
T02818
Name
(RefSeq) probable DNA helicase MCM9 isoform X2
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sita03032
]
101780408
03400 DNA repair and recombination proteins [BR:
sita03400
]
101780408
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101780408
DNA replication proteins [BR:
sita03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101780408
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101780408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA
MCM_N
AAA_16
FtsK_SpoIIIE
AAA_22
RuvB_N
Motif
Other DBs
NCBI-GeneID:
101780408
NCBI-ProteinID:
XP_012700868
UniProt:
A0A368QS82
LinkDB
All DBs
Position
IV:complement(7390096..7400884)
Genome browser
AA seq
660 aa
AA seq
DB search
MSSSEKKKKEDEAQVGALAGFLQDSYSDNIHSILLDDDPSKLHFPLVIEFAELMDFDPKF
AGKLYSYPDKYLSLLDKAARCVKGDMIEELGDLKHAASKKLVHVRIDVSGSPLEFPEASP
SIGKVRANHMKKLITLKGTVIRSGGVKMIERERYYMCKKCQHRFLLYPELEAGNRINLPA
LCPSESSRGCGSASFQFIEGTTVCRDYQEIKIQENVQLLGVGSIPRSMPVILMDDLVDNI
KAGDDVIITGILSAKWSPDIKDVRSNLDPMLLANYVRRTNELKSDIDIPAETEEEFKHFW
KKYRLTPLKGRNFILEGICPQIFGLFTVKLAVALTLIGGVQHVDASGTKVRGEPHMLLVG
DPGTGKSQFLKFAAKLSSRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCC
IDEFDSMREHDRTTIHEAMEQQTISIAKAGLVTTLSSRTTVFGATNPKGQYDPDESLSVN
TTLSGPLLSRFDIVLVLLDTQNSDWDKIVSSHILKENFDEKKDKTNASDVKWTLPKLRRY
INYVKRFKPVLTKEAERVISSYYQLQRRSGTHNAARTTVRMLESLIRLAQAHARLMFRNE
VEQLDAIAAILCIESSTTTSPIVDIVGNALHSNFTDNPDEEYKTQEKEILKKLGLIEGSP
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcggagaagaagaagaaggaggatgaagcccaggtgggtgcgcttgcgggc
ttcctccaagactcctactccgacaacattcacagcatcctcctcgacgacgacccatcg
aagctccatttcccgctcgttattgaattcgcggagcttatggacttcgaccccaagttc
gccgggaaactctactcctatcccgacaagtacctctccttactcgacaaggccgctcga
tgtgtgaagggtgatatgatcgaggaattgggtgatttgaaacacgcagcatcgaagaag
ttagtgcacgtacgtatcgacgtctctggatcaccgctagaattccctgaggcgtccccg
agtattggaaaggtgagggcgaatcacatgaagaaattgattaccctgaagggaactgtg
atcagatcgggtggcgtcaagatgattgagcgagagaggtattacatgtgcaagaagtgt
cagcacagattcctgctttatcctgagctggaggctgggaatcgtataaaccttcctgca
ttgtgtccatcggagagttcaagaggatgtggaagtgcttctttccagttcatagaaggt
actaccgtctgccgtgattaccaagaaatcaaaattcaagaaaatgtacaacttctgggt
gttggatctataccccgttcgatgcctgtaattttgatggatgaccttgtcgataacatt
aaagctggagatgatgtcattattacgggtatattatctgccaaatggtctcctgatatt
aaggatgtgcgatccaatcttgatcctatgctgcttgccaattatgtgaggagaacaaat
gagctgaaatctgatatagacattcctgcggaaactgaagaggagtttaagcatttctgg
aaaaaatacaggcttactccactaaaaggaagaaactttatcttggaaggcatctgtcct
caaatttttgggctattcactgtaaagcttgcagttgctcttacattaattggtggagtg
cagcatgttgatgcttctggaacaaaggttcgtggagaaccccatatgcttcttgttggt
gatccaggtactggtaaatctcagtttttaaagtttgctgctaaattgagcagccgctct
gtgatcacaactggccttggaagcaccagtgctggtttaactgttacagctgtcaaggat
ggaggagagtggatgcttgaggctggtgctcttgttctggctgatggtggtttatgctgc
attgatgaattcgacagcatgcgagagcacgacagaacaacaatacatgaagccatggag
caacagacaataagtattgcaaaggctggattagtcacaacactcagttcaaggactact
gtctttggtgccacgaatccaaaagggcaatatgaccctgatgaaagcttatctgtgaat
acaacactttcaggaccactgttgagtagatttgatatagttcttgttctcttggataca
caaaattctgattgggataaaatagtttcatctcatatattgaaggagaattttgatgaa
aagaaagacaagacaaatgcttctgatgtaaaatggacgctccccaagttgagaaggtac
atcaattatgtaaagcggtttaaaccagttttgacaaaggaggcagaaagagttatctcg
agctattatcagcttcagagaagatcaggaacacataatgcagcaagaacaacggtacgc
atgcttgaaagtttgataaggcttgcacaagcacatgcaaggctaatgttcagaaatgag
gttgaacaactagacgccattgctgccatattgtgcattgaatcctccacgacaacatct
ccaatagtggacattgttggaaatgctctgcactcaaattttacagataaccctgacgaa
gaatataaaacacaggagaaggagatccttaagaagcttggactaattgaaggttcccca
taa
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