Shewanella japonica: SJ2017_0109
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Entry
SJ2017_0109 CDS
T04959
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sja
Shewanella japonica
Pathway
sja01501
beta-Lactam resistance
sja01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SJ2017_0109
01503 Cationic antimicrobial peptide (CAMP) resistance
SJ2017_0109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sja03036
]
SJ2017_0109
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_0109
01504 Antimicrobial resistance genes [BR:
sja01504
]
SJ2017_0109
Chromosome and associated proteins [BR:
sja03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SJ2017_0109
Transporters [BR:
sja02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SJ2017_0109
Antimicrobial resistance genes [BR:
sja01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SJ2017_0109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
HH_CzcB
HH_EMRA
YknX_C
HH_AAEA_pHBA
HH_CyaD
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
ARD20458
UniProt:
A0ABM6JFB0
LinkDB
All DBs
Position
131514..132686
Genome browser
AA seq
390 aa
AA seq
DB search
MMSLGVRTVMHKALKIASVITAALWITACGQAQKAQAPQEAPPVPVGVLSVTEQSQAIHV
ELPGRSRAYLEAEVRPQVSGIITNRGFVEGKDVEAGQSLYQIDSATYKAALISAEADLAS
ANASLASAKATADRYAALVQTNAISKQDFDEADAAYKEAIANVTVAKAAINTANINLEYT
EVKAPISGRIGKSSVTPGALVTANQSDTLAKIQQLDPINVDIAQSSAQLLRLKAKLKAGK
LQQSENAEVKLILEDGSTYEQTGTLQFAEVSVDEATGSVTLRAEFPNPDGVLLPGMYVRA
ILNAGQDPKAILVPQKALTRNTKGQAVAMVVGAENKVETRIVTTAEVINHQWRVTDGLQA
GDKLIVDGLQKIRPGAVVTPQVLSATPATK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcattaggagtaagaacagtcatgcataaagcactgaaaatagcctcagttatc
actgcggctttatggattacagcatgtggtcaagcccaaaaggctcaggccccgcaagaa
gcaccacccgttccagttggcgtgttgagtgtgactgagcaatctcaagctattcatgtt
gagttacctggtcgtagtcgtgcatatttagaagcagaagttcgtccacaggtctctggc
attatcacgaaccgtggttttgttgaaggtaaggacgttgaagctggccaatcactatat
caaatcgattcagcaacatataaagcggcgctgattagcgcagaagctgatttagcaagt
gcaaatgcgtctttagcatcggctaaagcgacagctgatcgttatgctgcattggtacaa
accaatgcgattagtaaacaagattttgatgaagcagatgcggcttataaagaagcgatt
gccaatgtaacggtagctaaagcggcaattaacacagcaaacattaaccttgaatacact
gaagttaaagcaccaatttcaggtcgtattggtaaatcaagtgtaactccaggcgctttg
gtaacagctaaccagtctgacaccttagctaaaattcagcagcttgatccaattaatgtt
gatattgctcaatcaagcgcgcaattactgcgtttaaaggccaagttgaaagctggcaag
ctacagcaaagcgagaatgctgaagtgaagttgattcttgaagatgggtcgacttatgag
caaacaggtacattgcaattcgccgaagtgagtgtggatgaagcaacaggttctgtgaca
ctacgagctgagttcccgaatccagatggggtgttattacctggtatgtatgtacgtgca
attcttaatgcagggcaagatccaaaagcgattttagtgcctcaaaaagcgctgacacga
aacaccaaaggccaagctgttgctatggtagttggtgcagaaaacaaagtagagacacgc
attgtgactactgctgaagtcataaaccaccaatggcgtgtgactgacggattacaagcg
ggtgataaactgattgttgatggcttgcaaaaaatccgtcctggcgcagtcgtgacacca
caagttttatctgccactccagcaactaaatag
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