Shewanella japonica: SJ2017_0376
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Entry
SJ2017_0376 CDS
T04959
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
sja
Shewanella japonica
Pathway
sja00290
Valine, leucine and isoleucine biosynthesis
sja00660
C5-Branched dibasic acid metabolism
sja01100
Metabolic pathways
sja01110
Biosynthesis of secondary metabolites
sja01210
2-Oxocarboxylic acid metabolism
sja01230
Biosynthesis of amino acids
Module
sja_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
SJ2017_0376
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
SJ2017_0376
Enzymes [BR:
sja01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
SJ2017_0376
4.2.1.35 (R)-2-methylmalate dehydratase
SJ2017_0376
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Lum_binding
DNA_PPF
Motif
Other DBs
NCBI-ProteinID:
ARD20722
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All DBs
Position
418862..419467
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AA seq
201 aa
AA seq
DB search
MQAFTQHTGLAVAIDSTNIDTDQIIPKQFLSKVTRDGFGVHLFHDWRYLDEAGEQDNPDF
SLNLPRYKGASILLAQENFGCGSSREHAPWALADFGLRVVIAPTFADIFYGNSINNGLLP
VKLTHEQVNQLMAEVEDSEGANITVDLVSLTVTSPTGSVFDFSIAESARHKLLNGLDAIG
LTLEYAQAITDYEANIPAWRR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttttactcaacatactggtctagcggttgcgattgatagtacgaatatcgac
actgaccaaataattcctaagcaattcttatcaaaagtgacaagggatggctttggggta
catttattccatgattggcgttatttagatgaagcgggtgagcaagataatccagatttt
tcattaaatttacctcgttataaaggtgcgtcgattttattagctcaagaaaattttggc
tgtggttcaagtcgtgaacacgcaccatgggcgttagccgattttggtttgcgtgtggtc
atagcccccacttttgctgacattttttatggcaactcgatcaataatggtttattgcca
gttaagttaactcacgagcaagtcaatcaattgatggcagaggttgaggacagtgaaggt
gcgaatataaccgttgatttagtgtcgttaacggtgacctcaccaactgggagtgttttc
gatttttcgattgctgaatcagcgagacataagctattaaacggcttggatgcaattggc
ttaaccttagaatatgcacaggcaattacggactacgaggcgaatatacctgcttggcgt
cgttaa
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