Shewanella japonica: SJ2017_4143
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Entry
SJ2017_4143 CDS
T04959
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sja
Shewanella japonica
Pathway
sja01501
beta-Lactam resistance
sja01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SJ2017_4143
01503 Cationic antimicrobial peptide (CAMP) resistance
SJ2017_4143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sja03036
]
SJ2017_4143
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sja02000
]
SJ2017_4143
01504 Antimicrobial resistance genes [BR:
sja01504
]
SJ2017_4143
Chromosome and associated proteins [BR:
sja03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SJ2017_4143
Transporters [BR:
sja02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SJ2017_4143
Antimicrobial resistance genes [BR:
sja01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SJ2017_4143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
HlyD_2
Biotin_lipoyl
ProQ_C
Motif
Other DBs
NCBI-ProteinID:
ARD24370
LinkDB
All DBs
Position
4907139..4907906
Genome browser
AA seq
255 aa
AA seq
DB search
MNQTIVLLLLCLFSSHSLANNYLVGKLIPEKSVIIRSEVSGVVDSFQVDSGDSVSFNSSL
LSISKADYSLNLDLAKYNIDVKYAKLETQEKQLKRYQSLLSSKGISEGTFENQLRLANIS
RAEHNISKTEHEIAKRTLAKATPHAPFDGVVTLRSIEVGQFISIGDSLYAIADLETLKVR
FYLLESDFDQFKKGDKVKVTIPSIAQQITGQVSLFSPVMQENDPGFMVEVSLDNTNNQLH
SGMEVYVHFNGGEPQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaacgatagtacttttactgctatgcctgttttcttcacattctttagccaat
aactatcttgttggcaaactcattccagaaaagagtgtcatcattcgcagtgaggtcagt
ggcgtagttgattcatttcaagttgatagtggtgattcagtctcatttaattcgtctttg
ctctctatctctaaagctgattactccctaaacctagatttagcaaaatataatatcgat
gttaaatatgcaaagcttgagacccaagaaaagcaacttaaacgttaccaatccttgtta
tcaagtaaaggtatttcggaaggtacttttgaaaaccaacttcgccttgccaatattagc
cgcgctgaacataacatcagtaaaacggaacatgaaatagcaaaacgtactttagctaag
gcgactccccatgcaccatttgacggggttgtgacattgcgctcaattgaagttggtcag
tttatttctattggcgattcactctacgctattgctgatttagaaacacttaaagtacgc
ttttatctactagaaagtgattttgaccaatttaaaaaaggggacaaagttaaagtcacc
attccatcaatagcgcagcaaattactggacaagtgtcattattttcgccagtgatgcaa
gagaatgaccctggatttatggttgaagtctctttagacaataccaacaatcagcttcat
tcaggtatggaggtgtacgtgcattttaatgggggagagcctcaatga
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