Sulfonitrofixus jiaomeiensis: WCY20_12165
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Entry
WCY20_12165 CDS
T11201
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sji Sulfonitrofixus jiaomeiensis
Pathway
sji00300
Lysine biosynthesis
sji00550
Peptidoglycan biosynthesis
sji01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sji00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WCY20_12165
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WCY20_12165
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sji01011
]
WCY20_12165
Enzymes [BR:
sji01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
WCY20_12165
Peptidoglycan biosynthesis and degradation proteins [BR:
sji01011
]
Precursor biosynthesis
Amino acid ligase
WCY20_12165
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
DapB_N
CdiA_C
Motif
Other DBs
NCBI-ProteinID:
XAU12041
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Position
complement(2468753..2470048)
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AA seq
431 aa
AA seq
DB search
MKIELPSQPFRYVTENSKECDAETAFIKTKQNENYVEDAQKNGAHSIITASDIAPLFGVN
RIKIIGITGTNGKTTTASAIYSMLLDLGYKAAMQGTRGFFLNDTVAEGKSLTTPSVLNTY
RHIYQAVMAGCEYFVMEVSSHAIVQKRIEGIEFALKVLTNITQDHLDYHKSLEDYIYVKN
SFFADESKKLINKDEPRAEFNYKNAFSYGAEHPATYKVMAYSLNEGVSAVIKHFEEVESF
NSPMHGFFNLYNLTAAVAAVHLVTDKKLSEICEVVEHFGGVSGRMEKVSEEPLVIVDFAH
TPDGMEQVLNALREKEILVVFGAGGDRDISKRPLMGKVASKFAKKIYVTSDNPRTEDPDK
IIEDILKGIDDQSDVYVDVNRRNAIAKAIEDQNGDEIVLILGKGDEAYQIIYDKKLPFDD
REVARELLAAR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaattgagcttccttctcaaccttttcgttacgtcactgaaaactcgaaagagtgt
gacgctgagaccgcgtttataaaaacgaaacaaaatgagaactatgtagaggatgcccag
aaaaacggtgcacactccatcatcaccgcttctgacattgcgcctcttttcggggtaaac
cgtattaagatcattggcattaccggtaccaacggcaagaccactaccgcaagtgccatc
tattcgatgctgctcgatcttggatacaaggcagcgatgcagggcacccgggggttcttt
ttaaatgacacggttgccgagggtaaaagtctgacgacaccgagcgtcttaaatacctac
cgtcatatctatcaggctgttatggccggatgtgaatactttgtgatggaagtcagctcg
catgctattgtccagaaacggattgaaggaatagagttcgcactgaaggtcctgacgaat
attacacaggaccatctggattaccataaaagtcttgaggattatatctacgttaagaac
agtttttttgccgacgagagcaaaaaactgatcaacaaagatgagcctcgtgcagaattc
aattataaaaatgccttcagttacggcgcagaacatcctgctacctacaaagtaatggcc
tactctctgaacgaaggtgtcagtgctgtgatcaaacattttgaggaggtggagagtttt
aacagcccgatgcacggttttttcaacctctacaacctgacagcggctgtcgcagcggtt
cacctggtgacagacaagaagctcagcgagatctgtgaagtggtcgaacatttcggcggt
gtcagcgggcgcatggagaaggtaagcgaagagcctctggtcattgtcgattttgcccac
accccggacggcatggaacaggtcctcaacgcgctgagagagaaagagatcctggtcgtc
ttcggcgcgggcggcgatcgcgatatatcaaaacgcccgttgatgggcaaggtggcgtca
aagtttgccaaaaagatctatgtgacaagcgacaacccacgtacggaagaccctgacaag
atcatcgaagatattttaaaaggcattgatgatcagagcgacgtctatgtggatgtcaac
cgccgcaatgccattgccaaagcgatcgaggaccaaaacggtgatgagatcgtactgatc
cttggcaaaggcgatgaagcctatcagattatctatgacaagaaactgccgtttgatgat
cgggaagtggcccgtgagcttttagctgcgcgttaa
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